Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0010 ATGGAAGCAACAACAACAACTACTAGTACTACTACTCATCATGTAATATCTATTGTGAATGGAGGAGAAGAGAGTGTTGGTCAGAATAATAATAGTAATAAGGAAAAGAGTAGGGTAGTGAAGTTGTTATCTCTTGTCCCCATTGCCAGTTGTTGTTGCTATGTGAATTTGGACACAAGGAAGACAATCCACAGCATCAAAGTGGGAGTTTCATTGGTTTTGGTGTCACTATTTTACCTCTTGAACCCTCTCTTTGATCAAGTTGGAGAAAATGCAATGTGGGCTATCATGACTGTTGTTGTCACCTTTGAGTTCTATCCAGGAGCAACACTGGGAAAGGGTATCAACCGTGGATTGGGAACTATATTAGGAGGTGCAATGGGTGTCCTAACAGCAATTTTTGCCCAAACCATTGGAGGGATTGCTAACTCTATTATCATCGCTATTCTTATTTTTGTCTCCGGATCAGTTGCTACATATTTTCGACTGGTTCCAAGCATAAAGAAAAGATACGACTATGGAGTGATGATATTCATACTCACATTCAACCTGGTAGCGGTGTCTGGAGTGCGTGTTGAAGACCCTGTTTGGGAAATAGCACGTCAGCGTCTCTTAACGATAGTGATGGGTTTCATAGTCTGTGTTTGTGTCAACATCTTCGTTTTTCCCTTGTGGGCCAGCGACGAACTCCATCATTCTCTTGTAACTATCTTTTTCAACCTTGCCAACACAATTCAAGGCTGCTTGCTCGAACAAGAAGAAGATGCCAAATTCGTTACTGAAAAAGAAAAAGAAAAGGAATCATCATCCGCTGTTAATAACAAATTCTCTCTTTGTAATTCTGTCTTGGACTCCAAGTCAAAACATGAACTATTGGCAAATTTCGCAAAATGGGAACCTTGGCATGGGAAATTCGGATTTTCGTACCCTTGGGAGAAGTACTTGAAGATTGGACAAGTTCTTCGAGAACTTGCTGCATTTCTTCTTACAGTTGGAAATTGCCTCCAAGCATCAAAACAGGCCATGGCGTTATTGAAGGAATCACATTCAATCCAATTAGAATCATGGGAAGCAATTGGGTCAAAGGTTTCATGGGCTCTTAGAGAACTTGGAGATAGCATTAAAGAAATGAGGAAATTGGATGATGATAGCAATAGCATTTCCACAAAGTTGAAAGCAGCAAAAGCAGAACTAAGCCTTGTAATCTCCATGTCCAAGGTTTCATCACTTGATAATGAGGAAGTTCTAGCAATTGCAAGCTTTGTGTTATTGCTCTCTCAAGTGTTGGACAAGGTTGACCAATTGGTCAAAGAAGTTGATGAACTTGGACATCTTGCTGCTTTTCCTACTCATTAA 1356 0.4019 MEATTTTTSTTTHHVISIVNGGEESVGQNNNSNKEKSRVVKLLSLVPIASCCCYVNLDTRKTIHSIKVGVSLVLVSLFYLLNPLFDQVGENAMWAIMTVVVTFEFYPGATLGKGINRGLGTILGGAMGVLTAIFAQTIGGIANSIIIAILIFVSGSVATYFRLVPSIKKRYDYGVMIFILTFNLVAVSGVRVEDPVWEIARQRLLTIVMGFIVCVCVNIFVFPLWASDELHHSLVTIFFNLANTIQGCLLEQEEDAKFVTEKEKEKESSSAVNNKFSLCNSVLDSKSKHELLANFAKWEPWHGKFGFSYPWEKYLKIGQVLRELAAFLLTVGNCLQASKQAMALLKESHSIQLESWEAIGSKVSWALRELGDSIKEMRKLDDDSNSISTKLKAAKAELSLVISMSKVSSLDNEEVLAIASFVLLLSQVLDKVDQLVKEVDELGHLAAFPTH* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0010 451 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 13 449 - -
Amo16g0010 451 Pfam Aluminium activated malate transporter 58 442 IPR020966 GO:0015743
Amo16g0010 451 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 13 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0010 Amo-Chr16 312767 315830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0010 58 448 Miscellaneous Gene Families AT4G00910 38.107 2.98e-82 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0010 - - ahf:112758020 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0010 16 312767 315830 Amo16g0010 16 312767 315830 ECH
Amo16g0010 16 312767 315830 Amo06g0491 06 6854017 6856562 hybridization