Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1174 ATGGCTWCTGCTGCTTCTTCCTCCTCCTGGGTTCAACAACTWAGTTCGCTTGACTGGCACCAAGAGTCCTACCCTGCATTTAACGATTTCTCCGCTGTTCCCTTCTTCGCTCTCTTATTCCCCTCTGTTCGCTTCTTCCTCGACCGTTTCGTTTTCGAGAAAGTGGCCAGACGATTGATTTTCGGAAAGGGGCATGAGAAACTGGATCTTCAAACAGATGAGAGAAGAAAGAAGATTAGGAAATTTAAGGAATCAGCATGGAAATGTGTATATTTTCTATCAGCTGAAATTTTTGCTTTGTCTGTAACTTACAATGAGCCTTGGTTTACCAATACAATATATTTTTGGGTTGGGCCGGGAAATCAAATCTGGCCAGATCAAAAGATTAAGTTAAAACTGAAGGGGCTCTATATGTATGGTGCTGGATTTTATGCTTACTCCATACTCGCTTTAATATTTTGGGAAACTAAGCGCTCTGACTTTGGGCTGTCAATGACCCATCATGTTGCTTCTCTGGCTCTCATTGTGCTATCTTATATGTTTAGGTTTGTTCGTGTTGGATCAGTAGTTTTGGCTCTTCATGATGCTACTGATGTGTTTCTGGAGACAGGAAAAATGTCCAAATACAGTGGGGCTGAWACAATGGCTAGCATTGCATTTCTCCTTTTTGTTATCTTTTGGACGTTATTGCGCATCATTTACTATCCATTTTGGGTTCTTTGGAGTACAAGCTATGAAGTTATTTCTGTATTCGATAAGGAGAAGCACCAGAAGGATGGGCCAATATATTATTATGTGTTCAATACTCTACTCTTCTGTTTGCTTGTTCTAAATATTTATTGGTGGGTTCTGATGCTTCGGATGCTTGCTGATCAAATCCGAGCAAAAGGAAAAGTTAGTGAAGATATTCGCTCTGATTCTGAAGATGATGATGATTACAATGARCATGAAGAATGA 957 0.3992 MAXAASSSSWVQQLSSLDWHQESYPAFNDFSAVPFFALLFPSVRFFLDRFVFEKVARRLIFGKGHEKLDLQTDERRKKIRKFKESAWKCVYFLSAEIFALSVTYNEPWFTNTIYFWVGPGNQIWPDQKIKLKLKGLYMYGAGFYAYSILALIFWETKRSDFGLSMTHHVASLALIVLSYMFRFVRVGSVVLALHDATDVFLETGKMSKYSGAXTMASIAFLLFVIFWTLLRIIYYPFWVLWSTSYEVISVFDKEKHQKDGPIYYYVFNTLLFCLLVLNIYWWVLMLRMLADQIRAKGKVSEDIRSDSEDDDDYNEHEE* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1174 318 ProSiteProfiles TLC domain profile. 80 294 IPR006634 GO:0016021
Amo15g1174 318 SMART lag1_27 80 294 IPR006634 GO:0016021
Amo15g1174 318 Pfam TLC domain 81 287 IPR006634 GO:0016021
Amo15g1174 318 PANTHER LONGEVITY ASSURANCE FACTOR 1 LAG1 15 313 IPR016439 GO:0046513|GO:0050291
Amo15g1174 318 PANTHER LAG1 LONGEVITY ASSURANCE HOMOLOG 3 15 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1174 Amo-Chr15 92900654 92907143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1174 - - gmx:100807444 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g1174 15 92900654 92907143 Amo15g1174 15 92900654 92907143 ECH