Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1170 ATGGGCGATGCTTTGGGTTCTGATTTGATCAGTGATCTTCCTCAGAGCATCGTGGAGAGCATCCTGGTGCGGCTTCCAATAAGGGATGCTGTGAAAACTAGCATCTTATCGAGCAAATGGAGGTACAAATGGGCTTCCATTACTCAACTTGTCTTCGACGAAAAATGCGTCGATAGTTGCAGTGACCGAGATGTTGTTGAGAAAAGTGTTGTCAAGTTCATCACCAGATTGTTGTTTCTTCACCAAGGACCAATTCATAAGTTCCAAATCACGATTTCGTACTTMCAGAGCTGCCCCGAAATAGACCAGTGGATTCTTTTCCTRTCAAGGAATGATATTAAGGAGTTGGTTCTTGAATTAGGAGAAGGCGAATTCTTCAGGATACCATCCTGCCTTTTCAATTGTAAGAAATTGTCTCGCCTCGAGCTTTTTCGATGCGAGTTGGATCCGCCTCTTAGTTTTAAGGGATTCTTGTGTTTGAGGAGCCTAAACCTTCATCAAGTTCTGATATCGCCWGATGCAATCGAAGGCCTCATTTCCAARTGCCCTCTCTTAGAGAGCTTATCATTGTCGTACTTTGATAGCTTAGCTCTTAGTATCCGCGCTCCCAACCTCAAGTACTTGTATCTTGAAGGTGAATTCAGGGACATATGTCTTGATGATACTCCACTTCTCGTTGAAATCTCCGTTGCTATGTATATGACTGATGACATTGCTGAGCACTTTGAGCAGAGCGCAAGTTGCAATTTTCTTAAGTTTCTTGGTGGCGTGCCTAACCTTGAAAGGCTTGTTGGTCATATCTACTTCACAAAGTATTTGAGCATAGGTAATGATCCAGGATGTCTTCCAATAATATACAAGAATTTGGAGATCATCGAGTTAAATCAAGTAAGTTTTGAAGATATGAAAGAGATACTCGTTGTTCTTCGCTTGATTACCAGCTCTCCCAATCTAAAGGAACTTCAAATTTCAGGTTCATCAAACATACCAAGTGCCACAGATGCACCAGACTTGGATTTTTGGGAGAAAGAGTGCTCTTCAAAATGTAGACTAAGCCATCTTAGAGTCGTGCAGTTGACAGATATGTGTGGTGTGCCACATGAGATGGAGCTTATCAAATTCTTGCTTGCCTCATCTCCTGTGCTTGAGACAATGAGTATCATTCCTTGTGTATATGTTGTGGAAAGTCAATTAAAAATGTTAACCGAATTGGTGAAGTTCCGACGTGCTTCCGCCAAAGCAGAAATTGTTTTTGTCCGTGAGTAA 1266 0.4163 MGDALGSDLISDLPQSIVESILVRLPIRDAVKTSILSSKWRYKWASITQLVFDEKCVDSCSDRDVVEKSVVKFITRLLFLHQGPIHKFQITISYXQSCPEIDQWILFLSRNDIKELVLELGEGEFFRIPSCLFNCKKLSRLELFRCELDPPLSFKGFLCLRSLNLHQVLISPDAIEGLISKCPLLESLSLSYFDSLALSIRAPNLKYLYLEGEFRDICLDDTPLLVEISVAMYMTDDIAEHFEQSASCNFLKFLGGVPNLERLVGHIYFTKYLSIGNDPGCLPIIYKNLEIIELNQVSFEDMKEILVVLRLITSSPNLKELQISGSSNIPSATDAPDLDFWEKECSSKCRLSHLRVVQLTDMCGVPHEMELIKFLLASSPVLETMSIIPCVYVVESQLKMLTELVKFRRASAKAEIVFVRE* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1170 421 PANTHER - 7 403 - -
Amo15g1170 421 Pfam FBD 346 387 IPR006566 -
Amo15g1170 421 SUPERFAMILY RNI-like 105 336 - -
Amo15g1170 421 Gene3D Ribonuclease Inhibitor 106 411 IPR032675 -
Amo15g1170 421 PANTHER F-BOX PROTEIN-LIKE 7 403 - -
Amo15g1170 421 SUPERFAMILY F-box domain 6 83 IPR036047 GO:0005515
Amo15g1170 421 SMART 9598neu4hmm 348 419 IPR006566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1170 Amo-Chr15 92755171 92758413 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1170 4 215 EF-hand Containing Proteins AT5G41840 23.361 1.73e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1170 - - tcc:18610121 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g1170 15 92755171 92758413 Amo15g1170 15 92755171 92758413 ECH