Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1156 ATGGTTTATATTGGGGCTCATGGTGTTCAAGCTCTGCACCGATACAAATATAGTGGCGTAGATCATTCGTACCTTGCCAAATATGTACTGCAGCCCTTTTGGAGCCGCTTTGTTAATTTTTTCCCGCTGTGGATGCCTCCAAACATGATCACTCTTACAGGATTTATGTTCTTGCTACTGTCTGCATTGCTTGGCTATATATACTCACTTCAATTGGATACAGCTCCACCGAGATGGGTTAATTTTGCGCATGGCCTGCTTCTTTTTCTATACCAGACATTTGATGCTGTTGATGGGAAGCAAGCTAGACGAACAAATTCTTCAAGCCCATTAGGGGAGCTGTTTGATCATGGGTGCGATGCACTTGCTTGCACATTTGAAGCATTGGCTTTTGGGAGCACAGCCATGTGTGGAAGAAGTACTTTCTGGTTCTGGTTGATATCTGCAATTACATTTTATGGTGCAACCTGGGAGCACTTTTTCACCAATACACTTATACTGCCAGTTGTAAATGGACCTACAGAGGGTCTTATGCTGATATATGTTGCTCACTTCTTTACTGCTTTTGTTGGTTCTGAGTGGTGGGCTCAGCAGTTTGGAAAGTCTTTCCCATTTTTGAACTGGTTGCCTTTTGTTGAGGGGATCACAACGTATAAAGTGGTATTGTTTTTGATGATAGCTTTTGGTGTTATACCAACAGTCACATTCAATGTTTGTAATGTTCATAAGGTTGTGAAGGCAAGAAACGGAAGCATGCCACTTGCATTGGCGATGCTTTATCCATTTGTGGTGCTTGTGGGAGGAGTTCTTATCTGGGATTATTTGTCTCCATCGGACATCATAAGGAGCTATCCACATTTAGTGATTATAGGAACAGGACTAACTTTTGGATATCTTGTGGGAAGGATGATTTTGTCCCACTTATGTGATGAACCCAAAGGCTTGAAAACTGGAATGTGCATGTCGCTCCTGTATCTCCCATTCGCCATTGCTAATGCACTTGCATCACGGCTAAATGATGGGGCTCCTCTAGTGGATGAGAGATTTGTTCTTCTTGGTTACTGTGCATTTTCAGGAACACTTTACTTGCATTTTGCTACATCTGTCATCCATGAGATTACGGATGCCCTGGGAATATATTGTTTCAGGATAACTAGGAAGGAAGCTTAA 1170 0.4231 MVYIGAHGVQALHRYKYSGVDHSYLAKYVLQPFWSRFVNFFPLWMPPNMITLTGFMFLLLSALLGYIYSLQLDTAPPRWVNFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACTFEALAFGSTAMCGRSTFWFWLISAITFYGATWEHFFTNTLILPVVNGPTEGLMLIYVAHFFTAFVGSEWWAQQFGKSFPFLNWLPFVEGITTYKVVLFLMIAFGVIPTVTFNVCNVHKVVKARNGSMPLALAMLYPFVVLVGGVLIWDYLSPSDIIRSYPHLVIIGTGLTFGYLVGRMILSHLCDEPKGLKTGMCMSLLYLPFAIANALASRLNDGAPLVDERFVLLGYCAFSGTLYLHFATSVIHEITDALGIYCFRITRKEA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1156 389 Pfam CDP-alcohol phosphatidyltransferase 46 152 IPR000462 GO:0008654|GO:0016020|GO:0016780
Amo15g1156 389 Gene3D - 22 249 IPR043130 -
Amo15g1156 389 PANTHER CHOLINE/ETHANOLAMINEPHOSPHOTRANSFERASE 2 1 386 - -
Amo15g1156 389 ProSitePatterns CDP-alcohol phosphatidyltransferases signature. 98 120 IPR000462 GO:0008654|GO:0016020|GO:0016780
Amo15g1156 389 PIRSF CHOPT 1 389 IPR014472 -
Amo15g1156 389 PANTHER ETHANOLAMINEPHOSPHOTRANSFERASE 1 386 IPR014472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1156 Amo-Chr15 91589170 91602997 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1156 49 389 Miscellaneous Gene Families AT1G13560 80.645 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1156 K00993 - gmx:732642 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g1156 15 91589170 91602997 Amo15g1156 15 91589170 91602997 ECH