Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0782 ATGTATTCTTCCAGAGGGAGCGGRGCTTACGGTCAATCGTACCCGGGTCAATCCGCATACGGCCAGAACCTGGGTTCTAATTTCACTGGAGCTTCTGTTGGAGGACATGATGTGGGGCAGCATTCTGTGGCATCAAGGCATTCAGCGATATTAGGTGCCTCTCAGGAAGTTGATGTTGCTGGATATCGCCCTCACAGTTCAACTGCTGCACAGTATGGGGGGCAGTATAGTGCGGTTTATGGCTCATCTGCTTTGAGCAGTGCACAGCAGGTTCCCTCGTTGGGTACCAAGGGAGCTTCATCATCAGCATTAGATGGTCGTGGAGGTTATAATTTGGGTGTTTCGGATTCGCCTAAGTTTGCTTCTGGAGAATATGTTCCGTCATCTGGTCATGGATATGGTCATAAGGTTGATCAATTGTATGGTGACAAAGGATTGGAATATTCTGGAATAGACAGGCGGCAATATGGTGAAAGGCAGAGTGCTTATATTGGTAGGGACTTGGGTGATGCAGCTGGACGGTATGCTGCTGATCCTATTGGGTTTAGTCATCAACATCAGCAAGCAGAAATCTATGACCGCATTGATCAGGCAGCTTTGCTTCGACAAGAGCAACTGCTGAAAGCTCAGCCTCTGCAAGCTGCTTCACTTGATGGGGGTGCTAGACAAGCTGATTATCTTGCAGCAAGGACTGCTGCTAGTCGTCACACTGCCCAAGATCTTTTGTCTTATGGAGGAAGGATTGATTCTGATCCACGTGCTTCATCAATGCTAAGTGCTGCTTCGTATAGTGGACAGCATGCACCATCAATATTGGGAGCAGCTCCAAGGAGAAACTTGGATGATCTACTGTATTCTCAGAATGCTTCAAATCCTGGRTATGGAGTGAGCCTACCACCTGGTAGGGATTACGCTAGTGGAAAAGCACTTCATGGAAATGCCATGGAGTTGGATTACCCAGGAAATGCCCTTTCACGTGGTGGGCACAATGACCTTAAAGATGACCGTGCTAGCTATCTACGAGAATTTGAGCTAAGGGAAGAAGAGCGTCGCCGGGAACGCTTGCGTGAGAGAGAGAGGGACAGAGAAAGGGAGAAAGAACGTGAACGATTGCGRGAGCGGGAACGAGAAAAGGAACGCGAAAGGGAGCGCGAAAGGGAGCGCATCTTGGAGCGGCGGGAAAAGGAAAGGGAACGAGAACGCAAACGTGCTCTTGAAACTAAGCGTGATCGGACTCCAGTGAGATCTTCCAAGGATCCCCGTGGTACATCAAAGGATCCTCGAGGATCATCTTTGACAAAGGATGGGAGATCTTCACGACGGGACTCCCCACATCATGTTGCTTCACATAGGCACCATTCACCTGTTAGAGAAAAACGGAGGGAATATGTCTGCAAGGTTTACCCAGCCCGTTTGGTGGATATTGAAAGGGATTACCTCTCGATAGATAGGCGATACCCCCGACTCTTTGTCTCTCCTGAATTTTCTAAGGTTGTTGTGAACTGGCCAAAGGAAAACCTGAAACTGTCTATCCATACTCCTGTCAGTTTTGAGCATGATTTTATTGAAGAAGGAAGTTTCACCGAGACTAGGGAATCATCTGGCAAGCTTTTGATGGGACAACCTCCAAATTCAATACAAGGAAATACAGTATGGAATGCTAAAATAATCTTGATGAGTGGACTTAGTAGGGGTGCATTGGAGGAGCTGTCATCTGATAAAATTTTAGATGATCGCATTCCTCATATTTGCAGTTTCCTTAAGTTTGCGGTCCTTAAGAAGGACCATTCTTTCATGGCAGTTGGTGGCCCATGGGAACCAGTTGATGGTGGTGATCCATCTGTTGATGACAACTCTCTGATTAGAACAGCGCTCAGATATGCAAAGGATGTTATCCAGCTTGATTTGCGTAATTGTCAACAGTGGAACCGTTTTCTAGAGATACACTACGATAGACTTGGAAAAGATGGTTTCTTTAGCCACAAAGAGATCACTGTACTGTATGTTCCTAATTTGTCTGATTGTCTCCCCAAGTTGGATGAATGGCGTGAGCATTGGCTTGCCCACAAGAAAGCTGTGGTTGAGAGAGCACGCCAACTTGCTTTGAAAAGAGAGAACACAAGAGATAGCAAGGAAGCTTCTAAAGACAAATTGGATAAGAAGAAGGAATCTGCCTCATCTGGACAATCTGGAGATGCTAAGAAAAAGGAGAAAGATAGCAATAATGTTAAGGTGGAAGCTGAAGAGAAAACTGCAGTAGATAATTCTAAAACTTCTAAACATGATGGCTCTGACATTGGTGAAGGAGGCAAGAATGCTGAGAAAAAACAGCCCGAAGCTGATGCTTGTCAGACATCAGGGAGTGTGAAATCTGTAAAGAAGAAGGTTATAAGGAAGGTTGTAAAGCAAAAAGTTGTCAACAAGGCAAATGATGCCACAAACAAGCAACTCGATAAATCAGATGAGAAGAATGGTGTGGAGAAAATAGAAACATCTACTGTTCCGGTTGAGGGCGAGAAATCTTCTGTGGGTCCTGATGGGATTCAGGATGCTACGAATAATGTAGTTTCCAAGGATATTATTATGAATAATACTGATGGGGAAGAGGGGAAAGATAAGGATATGATTAGTTCTGAAGACAAACCTCTAGATAAGCCAGAAACAGTGGGCAATGCTACTATTAAAACAATAAAGAAGAAAATTATCAAGCGGGTACCAAAAAAGGTGGTTGGTGAAGCATCAAAAACTCTTCCTGAGACTAAAACTGGAGGGAACGTAGAGGCAGTTAAAGCAGAAGACGGTACCCAGAGCACGAGCAAGCAGATTGCTGGTGCAGGTATTGCAGCGACACAAGGGAAGAAAGCTATGAAGGTGGTTCCTAAGAAAAAGTTAAAAACACCTACCACTGTAAAGCAAAATGATACATCTGCTTCCAATAAAACTGAAACAAAATCTGACAAGGATGACAAGAAGTCTGAAGAAAATGTTGTGGCAGGCCAAGCACAAGATGTCACTCAGAACAGGGGTAGGCAGACAGCTGATGCGGATACCTCAGTGACAGAAGTGAAGAAAACTGTGAAGGTAGTTTCTAAAAACAAGTCAAAGGAAACCTCTGAAAAGCAAGATGGTGCAGCTGATTCCAATAAAAATGAAATGAAGTCCAACAAGGATGGCATAAAAGATGAAAAGGACGTTGGAAAAATTGGAGCCAAGTTAGAWAAACAGAAAGCCTCTGAGAAAGATGTTCACAATGTTAAAGGGAAYTTGAAAGATGGGGATAAGGCAAAAGACATGAAAGGAACAAAAGATGGAGATAAGTCGAAGGACATGAAAGGAACAAAAGAGAGAGATGGAAAAGACGAGTCTAGAAGCAAATCTAGTAGAGAATTGAAGGAGAAGAAGAAGTCCGATGAGCCTCCTCGGCACCCTGGATTTGTTCTTCAAACAAAATGGACTAAAGATTCTAAACTTCGTTCGTTGTCATTGTCACTGGATTCGTTGCTGGATTATACTGACAAAGATGTTGAAGAATCGACACTTGAGCTTTCATTGTTTGCTGAATCATTTCATGAAATGCTCCAGTTTCAAATGGGTTGTACGATTTTGGCATTTCTTCAGAAACTGCGCATTAAGTTTGTGACGAAAAGGGCCCAGCGAAAGAGGCAGAGAGAAGAGAGCCATGAGAAGGATAGTGAAAGTAAATCACCTTCAAAACGTACAAAGAAAGATAATCCTCCTGTGAAGAGTGAGCCTGCAGATATGGACACAACAGTTCCAACCGAAGGAGACGATGATAAAATTGTTGTACAGAAAGGTAAGCCTGGTGGTGAAAAAGAGGAGGATAAACCTGTTGAGAAGGAGGATGTGAAGATGGAAGATGGATCAGACGAGGAGGAAGATCCTGAGGAGGATCCTGAAGAATATGACGAAATGGAAAATGGTAGTCCGCAACATGATTCATCTGAGTATAAAAATGCTGAGCAAGAGGCCAATACAGATGTTGAATCCAAAAATATTACTGGCAACGCAAAAGCTGCAGAATCTTCTAAAGAGGAAACTAAGGTTATAATAGAAGAGGTGAAAGAATCCAAGTCTGATGCACATTCCACCGAAGAGAAGGAAGGAAAGGTTGATAAAATAAAGAAAGAATCCCCTGCGGTTAAGGAGGCTGTTGTGGACAAAGAACTTCTTCAGGCTTTCCGATTCTTCGATAGGAATCAAGCTGGCTACATTAGAGTTGAAGACATGAGATTAGTCGTCCACAATCTAGGGATGTTCCTTTCTCATAGGGATGTTAAGGAACTTGTACAAAGTGCATTATTGGAGAGCAACACTGGGAGGGACGATCGGATACTCTATAATAAGCTGGTGCGGATGACTGATGTTTGA 4389 0.4365 MYSSRGSGAYGQSYPGQSAYGQNLGSNFTGASVGGHDVGQHSVASRHSAILGASQEVDVAGYRPHSSTAAQYGGQYSAVYGSSALSSAQQVPSLGTKGASSSALDGRGGYNLGVSDSPKFASGEYVPSSGHGYGHKVDQLYGDKGLEYSGIDRRQYGERQSAYIGRDLGDAAGRYAADPIGFSHQHQQAEIYDRIDQAALLRQEQLLKAQPLQAASLDGGARQADYLAARTAASRHTAQDLLSYGGRIDSDPRASSMLSAASYSGQHAPSILGAAPRRNLDDLLYSQNASNPGYGVSLPPGRDYASGKALHGNAMELDYPGNALSRGGHNDLKDDRASYLREFELREEERRRERLRERERDREREKERERLREREREKERERERERERILERREKERERERKRALETKRDRTPVRSSKDPRGTSKDPRGSSLTKDGRSSRRDSPHHVASHRHHSPVREKRREYVCKVYPARLVDIERDYLSIDRRYPRLFVSPEFSKVVVNWPKENLKLSIHTPVSFEHDFIEEGSFTETRESSGKLLMGQPPNSIQGNTVWNAKIILMSGLSRGALEELSSDKILDDRIPHICSFLKFAVLKKDHSFMAVGGPWEPVDGGDPSVDDNSLIRTALRYAKDVIQLDLRNCQQWNRFLEIHYDRLGKDGFFSHKEITVLYVPNLSDCLPKLDEWREHWLAHKKAVVERARQLALKRENTRDSKEASKDKLDKKKESASSGQSGDAKKKEKDSNNVKVEAEEKTAVDNSKTSKHDGSDIGEGGKNAEKKQPEADACQTSGSVKSVKKKVIRKVVKQKVVNKANDATNKQLDKSDEKNGVEKIETSTVPVEGEKSSVGPDGIQDATNNVVSKDIIMNNTDGEEGKDKDMISSEDKPLDKPETVGNATIKTIKKKIIKRVPKKVVGEASKTLPETKTGGNVEAVKAEDGTQSTSKQIAGAGIAATQGKKAMKVVPKKKLKTPTTVKQNDTSASNKTETKSDKDDKKSEENVVAGQAQDVTQNRGRQTADADTSVTEVKKTVKVVSKNKSKETSEKQDGAADSNKNEMKSNKDGIKDEKDVGKIGAKLXKQKASEKDVHNVKGNLKDGDKAKDMKGTKDGDKSKDMKGTKERDGKDESRSKSSRELKEKKKSDEPPRHPGFVLQTKWTKDSKLRSLSLSLDSLLDYTDKDVEESTLELSLFAESFHEMLQFQMGCTILAFLQKLRIKFVTKRAQRKRQREESHEKDSESKSPSKRTKKDNPPVKSEPADMDTTVPTEGDDDKIVVQKGKPGGEKEEDKPVEKEDVKMEDGSDEEEDPEEDPEEYDEMENGSPQHDSSEYKNAEQEANTDVESKNITGNAKAAESSKEETKVIIEEVKESKSDAHSTEEKEGKVDKIKKESPAVKEAVVDKELLQAFRFFDRNQAGYIRVEDMRLVVHNLGMFLSHRDVKELVQSALLESNTGRDDRILYNKLVRMTDV* 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0782 1462 MobiDBLite consensus disorder prediction 1026 1141 - -
Amo15g0782 1462 Pfam LAIKA domain 1140 1205 IPR045353 -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 846 861 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 1 47 - -
Amo15g0782 1462 Gene3D - 1392 1461 - -
Amo15g0782 1462 SUPERFAMILY EF-hand 1389 1459 IPR011992 -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 705 778 - -
Amo15g0782 1462 SMART DBC1_2 580 705 IPR025954 -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 809 888 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 931 945 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 1219 1347 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 1311 1331 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 1219 1249 - -
Amo15g0782 1462 Pfam BURAN domain 475 561 IPR045354 -
Amo15g0782 1462 PANTHER CCAR1 HOMOLOG 1 833 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 814 828 - -
Amo15g0782 1462 Coils Coil 345 410 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 705 787 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 1259 1290 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 1 30 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 1332 1346 - -
Amo15g0782 1462 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 1016 1461 IPR025224 GO:0006355
Amo15g0782 1462 PANTHER CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN 1 833 IPR025224 GO:0006355
Amo15g0782 1462 Pfam DBC1 582 698 IPR025954 -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 864 886 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 913 1147 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 404 457 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 283 309 - -
Amo15g0782 1462 ProSiteProfiles EF-hand calcium-binding domain profile. 1391 1426 IPR002048 GO:0005509
Amo15g0782 1462 PANTHER CCAR1 HOMOLOG 1016 1461 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 404 443 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 980 996 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 1291 1310 - -
Amo15g0782 1462 MobiDBLite consensus disorder prediction 998 1025 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0782 Amo-Chr15 53586210 53596372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0782 404 794 EF-hand Containing Proteins AT2G03150 53.250 1.71e-118 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0782 K25827 - gmx:100790366 1206.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0782 15 53586210 53596372 Amo15g0782 15 53586210 53596372 ECH
Amo05g2596 05 59262432 59272621 Amo15g0782 15 53586210 53596372 hybridization