Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0586 ATGGAGTTTAAAGAGTCTATTTTGATTAAACTTGTGGTGATGTTACAGTGTTTGACGTTAGTTCTATGTGCTTCACAGGATTTTGATTTCTTCTACTTTGTTCAGCAGTGGCCAGGATCATACTGCGACACACAGCAGAGCTGTTGCTACCCAACAAGTGGGAAGCCTGATGCAGATTTTGGGATTCATGGTCTTTGGCCAAATTACAATGATGGTTCATACCCATCTAACTGTGATTCTAGCAACCCCTTTCAGCAATCTCAGGTATCAAATTTGATAAGCACCATGCAAAAGGAATGGCCCACACTAGCGTGCCCAAGCGGGAATGGAATACAATTCTGGTCCCATGAATGGGACAAACATGGAACTTGCTCAGAGTCACTACTTAACCAACATGACTATTTTGAAGCAGCTCTTAACCTTAAACAAAAAGCTAACCTCCTCCAAGCTCTTACCAGTGCAGGTATAAATCCAGATGGGGGATTCTACAGTTTGAGCAGCATTAAGAATGCAATAAGTGATTCAATTGGGTTCACTCCATTCATTGAGTGCAATTCAGACTCATCCGGTAACAGCCAGCTTTACCAAGTTTACTTGTGTGTGGACACTAATGCTTCAAGCTTCATTGACTGCCCTGTTTTTCCACATGGAAAATGTGCCTCCAATATTGAGTTCTCATCTTTTTGA 687 0.4178 MEFKESILIKLVVMLQCLTLVLCASQDFDFFYFVQQWPGSYCDTQQSCCYPTSGKPDADFGIHGLWPNYNDGSYPSNCDSSNPFQQSQVSNLISTMQKEWPTLACPSGNGIQFWSHEWDKHGTCSESLLNQHDYFEAALNLKQKANLLQALTSAGINPDGGFYSLSSIKNAISDSIGFTPFIECNSDSSGNSQLYQVYLCVDTNASSFIDCPVFPHGKCASNIEFSSF* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0586 228 CDD RNase_T2_euk 28 225 IPR033697 -
Amo15g0586 228 SUPERFAMILY Ribonuclease Rh-like 22 226 IPR036430 GO:0003723|GO:0033897
Amo15g0586 228 Pfam Ribonuclease T2 family 28 211 IPR001568 GO:0003723|GO:0033897
Amo15g0586 228 PANTHER RIBONUCLEASE T2 8 228 IPR001568 GO:0003723|GO:0033897
Amo15g0586 228 ProSitePatterns Ribonuclease T2 family histidine active site 1. 60 67 IPR018188 GO:0003723|GO:0033897
Amo15g0586 228 Gene3D - 22 228 IPR036430 GO:0003723|GO:0033897
Amo15g0586 228 PANTHER BNAA02G26660D PROTEIN 8 228 - -
Amo15g0586 228 ProSitePatterns Ribonuclease T2 family histidine active site 2. 113 124 IPR033130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0586 Amo-Chr15 37288883 37291590 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0586 K01166 - gmx:100305644 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0586 15 37288883 37291590 Amo15g0586 15 37288883 37291590 ECH