Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0308 ATGCGTTCATCAGAGGATAATAAGGGGTCTAAATATTCTTCTAGCTTTCCTTATTGGTCCTTTCTATGCTGCAAAAGTAGCATTTCTTCATCAGAAGTTGAACCAACCCATGAAAACAATATGATGAGCAACGAATCTTCAGAGTTATCACATGCCAATGAGAAAAAGAAGCCCGGTGGATGGAAGGCCATGCCTTTTATCTTAGGGAATGAATCGTTTGAGAGATTGGCAGCATTCGGTTTATTTGCCAACTTTATGGTGTATTTGACAAGAGAATTTCATATGGAACAAGTATATGCTTCAAATATTCTAAATATATGGGGTGGTGTCACTAATTTCTTCCCTTTAATTGGTGCCTTCATTTCTGATGCCTATGTTGGTCGCTTCCGGACCATAGCTTATGCTTCATTTGCTTCTTTTCTGGGTATGATGGTGGTGACTTTAACAGCTTGGTTACCAAAATTGCACCCTCCAGCATGCACTCAAGAGCAACTAGCCTTAAACCAATGTGTTAGGGCAAGCCCATCAAACATTGGTGTTCTTATCTTGGGTCTCACCGTCATGAGCTTAGGCTCGGCCGGCATAAGGCCGTGTAGCATACCCTTTGGGGTCGACCAGTTCGACCCCTCGACGGACGAGGGGCGAAAAGGAATCAATAGCTTCTTTAATTGGTACTACACAACATTCACAATTGTGTTGGTGATCACCCAAACAGTTGTTGTCTACATACAAGATGAAGTTAGCTGGAAGATTGGTTTTGCTATTCCAACAATTTGCATGTTGTGTTCAATAATCTTGTTCTTTGTGGGAACAAGGATTTATGTTCATGTGAAGCCAGGAGGGAGTGTCTTTTCTGGAATTGCACAAGTTCTAGTCGCTGCCTATAAAAAGAGGAAAATTGAGCTCCCAAGTGAGAAGCAGGGTCTTGGAATTTACTATGATCCACCCTTGGATGGGACAGCAAATTATGTTTTGTCTAAGCTTCCTCTCACCAATCAATTCAGTGGTTTGAACAAAGCAGCCATAATAATGGAGGGTGAACTAAAGGAAGATGGGAGCAGAGTAAACCATTGGAGACTAGCAAGCATTCAACAAGTGGAAGAAGTCAAATGCTTAGCAAGAATATTCCCAATTTGGGCCGCAGGTATTCTAAGCCTAGTTTCCATGGCCCAACAAGGAACATTCACAATCTCACAAGCTTTGAAAATGGACCGTCACTTGGGACCGAAATTCCAAATCCCAGCAGGGTCCTTAAGCGTCATTTCACTCCTCACCATAGGCTTCTGGGTCCCATTCTATGACCGAGTCATGGTTCCATCACTAAGGAAAGTCACAAAGCACGAAGGTGGCATCACGTTGCTCCAAAGAATTGGAATTGGAATGGCTTTCTCAGTCTTGTCCATGGTTGTAGCTGGTTTGGTTGAGAGGGTTAGAAGAAACGCCGCAAATTCGAACCCGAATCCGTTGGGAATTGCACCCATGTCAGTGTTGTGGCTTGCCCCACAATTGATTCTAATGGGTTTGTGTGAGGCGTTCAACATAATTGGACAAATTGAATTTTTCAATAGACAGTTCCCCGATCATATGAGAAGCGTTGCTAATGCATTGTTTTCTTGCTCTTTTGCGGCGGCTAGCTATGTTAGTAGCATATTAGTAACCACGGTTCATGGTGTTACTAGAACACATAGCCACCCAGATTGGTTAACTAATGATTTAAATGCTGGGAGGTTGGATTATTTTTACTATCTTATTGCTGTGATTGGAGGATTGAACTTGGTTTATTTTGTGTTTGTTGCTCAAAGATATCGTTACAAGGGGAGTGTTGATCTTCAAGAGAAAGATCAAGATGTTGAGATAGCTTCACATAATACTAAAGATTAG 1881 0.4205 MRSSEDNKGSKYSSSFPYWSFLCCKSSISSSEVEPTHENNMMSNESSELSHANEKKKPGGWKAMPFILGNESFERLAAFGLFANFMVYLTREFHMEQVYASNILNIWGGVTNFFPLIGAFISDAYVGRFRTIAYASFASFLGMMVVTLTAWLPKLHPPACTQEQLALNQCVRASPSNIGVLILGLTVMSLGSAGIRPCSIPFGVDQFDPSTDEGRKGINSFFNWYYTTFTIVLVITQTVVVYIQDEVSWKIGFAIPTICMLCSIILFFVGTRIYVHVKPGGSVFSGIAQVLVAAYKKRKIELPSEKQGLGIYYDPPLDGTANYVLSKLPLTNQFSGLNKAAIIMEGELKEDGSRVNHWRLASIQQVEEVKCLARIFPIWAAGILSLVSMAQQGTFTISQALKMDRHLGPKFQIPAGSLSVISLLTIGFWVPFYDRVMVPSLRKVTKHEGGITLLQRIGIGMAFSVLSMVVAGLVERVRRNAANSNPNPLGIAPMSVLWLAPQLILMGLCEAFNIIGQIEFFNRQFPDHMRSVANALFSCSFAAASYVSSILVTTVHGVTRTHSHPDWLTNDLNAGRLDYFYYLIAVIGGLNLVYFVFVAQRYRYKGSVDLQEKDQDVEIASHNTKD* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0308 626 Gene3D MFS general substrate transporter like domains 33 609 IPR036259 -
Amo15g0308 626 PANTHER PEPTIDE/NITRATE TRANSPORTER 47 613 - -
Amo15g0308 626 Pfam POT family 129 561 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo15g0308 626 MobiDBLite consensus disorder prediction 34 56 - -
Amo15g0308 626 SUPERFAMILY MFS general substrate transporter 77 603 IPR036259 -
Amo15g0308 626 MobiDBLite consensus disorder prediction 34 48 - -
Amo15g0308 626 CDD MFS_NPF1_2 64 602 - -
Amo15g0308 626 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 47 613 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0308 Amo-Chr15 11292904 11299447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0308 32 624 Organic Solute Cotransporters AT1G69870 60.935 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0308 - - gmx:100776472 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0308 15 11292904 11299447 Amo15g0308 15 11292904 11299447 ECH
Amo15g0308 15 11292904 11299447 Amo05g1637 05 30967044 30973588 PCT