Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0290 ATGGACCTCCCTCGTTTTGTTCCTCTTCTCTCAATTTTCCTTCTCCTTATTCCACCTTTGACCTGTGCTCAAGTGTGCCAAAGAAACTGTGGCAAAGAATACCTAAAGTACCCATTTGGTAGTGGCCCTGGTTGTGGTAACCCACTCTTCCAACCACACATTTCTTGCTCCCAACAAAAACTTACCTTCACAACTCACACAGGCTCGTACCTTGTTACTTCAATTGACTATTCAAACCAAGTAATTTACATTTCTGACCCTACTATGTCAACATGTTCTTGCACTCTCCCTAGCAAAGGTTTTGGCCTAGATTGGAATGCCCCATTCACTTTCCATGATAGCACCATCTTTGCCCTAGTTGATTGTTCAATCAATTCATCATCAATATGCACAACACAAAGTTATGATGATATTGATGATGGTAACAACAAAAATTCAAATTCAAATTCAAATTCCAAGCTTTTGTGTGATCAAAGTACACCAATTTGTAGTCTTTTGTATTCATGCAAACCCATTAGTACTATTAACCTTCCAATTTCCACATGTTGTGTTTATGAACCGGTGAATCTTGGTCCGTCGTTCGAGATGGATCTTCAGAAGCTTCAGTGTCCGTCATATACCGGATTCTACAACTTTGACGAAGGAGAATCTGATCCTGAGAAGTGGAACTATGGGATAGCATTAAAGTACAAGTTTAGTGTCACGGATGATTATCCTAACTCTTGTGCTGCTTGTGAAAAGAGTTATGGGGTGTGTGGATACAATGGACCTTATAATTCATTTATATGCAATTGCCCTAATGGCATCAACACTACAACAGATTGTTACTTCACATCATCTTACAATAATGCTTTTAGAAACGGGATTGCTTATTGGTTGATTTGTCCTATGCTTATGGATGATCTATCAAAAAGCAAGCTCAGAAACCATTAA 933 0.388 MDLPRFVPLLSIFLLLIPPLTCAQVCQRNCGKEYLKYPFGSGPGCGNPLFQPHISCSQQKLTFTTHTGSYLVTSIDYSNQVIYISDPTMSTCSCTLPSKGFGLDWNAPFTFHDSTIFALVDCSINSSSICTTQSYDDIDDGNNKNSNSNSNSKLLCDQSTPICSLLYSCKPISTINLPISTCCVYEPVNLGPSFEMDLQKLQCPSYTGFYNFDEGESDPEKWNYGIALKYKFSVTDDYPNSCAACEKSYGVCGYNGPYNSFICNCPNGINTTTDCYFTSSYNNAFRNGIAYWLICPMLMDDLSKSKLRNH* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0290 310 Pfam Wall-associated receptor kinase galacturonan-binding 26 86 IPR025287 GO:0030247
Amo15g0290 310 PANTHER WALL-ASSOCIATED RECEPTOR KINASE, GALACTURONAN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 9 288 - -
Amo15g0290 310 Pfam Wall-associated receptor kinase C-terminal 216 267 IPR032872 -
Amo15g0290 310 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 9 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0290 Amo-Chr15 10462300 10464318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g0290 18 123 Receptor kinase-like Gene Family AT5G02070 32.432 5.07e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0290 - - gmx:100817815 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0290 15 10462300 10464318 Amo15g0290 15 10462300 10464318 ECH
Amo05g1679 05 32609719 32611914 Amo15g0290 15 10462300 10464318 hybridization