Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0278 ATGTCAATGGATCAGATGGCGTTTGTGACTCCGAGAGGGTCACTGTCGAGCATCGGAGACTCGACGGAGCTTGAGGTCAATCCCAATCTCACTCTCAGCGATAAGCTCAGGGTTTTCAAGAGTTCCTCCTTTGATCCCAATGCCTTCATCCAAACCAAATCCCGCGCCATGAATGAAAAGGAGATAAGGCATTTGTGTGTTTATCTTGTTGACCTGAAGAAGGCTTCTGCTGAAGAAATGCGGAAAAGTGTTCTTGCTAACTACTCAGCCTTCATTCGTACATCCAAAGAGATTTCGGATCTTGAGGGAGAGCTAGTTTCCATGAGAAATCTTCTGGTGACGCAGGCCGCATCAGTTCATGCTATAGCAGAAGGTTGTCAGCTTAGTACCTTGGTTGCTAGAAAAGAAAACTCGGACATGGAAGAGATACTAAGTCAAAAAACGGATCTATCCAAGACAGAGAAATGGCTGATAGAGTTTCTAGAAACGCTGGAGGTTCTATTAGCAGAGAAAAGAGTGGACGAAGCGATGGCTAAGTTGGAAGAAGGCAAAAAAATGGCAGAAGAAATTACTAGAGAGAAACTTCTGAGTCCAGTTTTGTTCCAGGCATTGGAAGATGCCCTTGCTGATAAGAAGAAAAAATTAGCTGATCAGCTAGCAGAGACTATGGGCCAGTCATCCACTCGAAACTCAGAAATTCGTTTCACAGCTTGGGCTTTGAAAAAGCTAGGAGACGGTCCTCGTGCTCACACATTACTACTAAATGCACACAAAGAAAAGTTGCAGCGTAAAATGAATGGTTTTGAGTCCACCAATGATGGAAGGGTTAAAGCGGCTGGTCAATACACAACTAGCCTTTCACAGCTTGTCTTTTCCATCATTTCACGAGCTGCAACAGATTCTTTGACAGTGTTTGGCAAACAAGAGCCTGCATATAGTTCGGAGCTGGTTACTTGGGCCGTAGGGCAGGTTGAGAATTGTGCTCTTCTCCTAAAGAAGCGCATCCTTGCCTCGGCTGCTGCTACAGGAAGCCTCAGAGTTGCAGTTGAAAGTGTTCATGTTTGCATGAGCCACTGTCAACTGTTGGAGGCTAATGGATTGGCCCTTTCCCCTGTCTTGCTCAAACACTTTAGGCCATTAGTTGAGCAAGCATTGAACAATAATTTGAAAAGAATTGAACAAACCACTGCTGCAATTGCTCTTGGAGAGGAATGGTCACTTGTTTATGCACCAACCAGCAGGAATTCAGGCCTCGCTCCTGCTTCTTCTGTTTCATCATCCCAGCCAAAACTTTCAAGTAGTGCTCACAAATTCAACTCATTGGTTCAGGAACTTTTTGAAGATGTAGAACCTCTTGAAATCTTACAGTTAGATGGTCTTGCATATGAAGGCCTTCTACGGGTGTTCAACTCCTACATCAATCTGCTGATAAATGCATTACCAGGTTCGGTAGAAACTGAGAACCTGGAAGGTACATCAGTTCATAAAATTGTAAAGATTGCTGAGACTGAAGCACAACAGATAGCAGTGCTAGCCAATGCAATATTGCTAGCAGATGAATTAATCCCTCGTGCCGTTGTGAAGCTTTCACACAGCAGCAAAGGTGATGAGTCTCATAGAAAAGGATCAGACAAGCAACAAAGGCTTCCTGAACAGCGCGAATTGAAGAAGAGACTCCAGCGGGAAGTTGATCGCCTCAGAGACAGTTTCTGCAGGCAGCATGCTCTTGAGCTCATCTTTAATGAGGAAGGGGAAACACGCCTCAATGCAATGATGTATTTGAGTTTAGACGGACAAGGCCAACAACCTGAATGGTTTCCTTCTACAATTTTTCAGGAGCTCTTTGCAAAGCTTACAAGAGTGGCAACAATTGCAACAGATATGTTTGTGGGAAAAGACAGGTATGCAACCCTTTTGTTGATGAGACTTGCAGAGTCTGTGATCCTTTTTCTTGCTGATGACCAAACCTTCTGGGGAGAGGTAGAGACAGGCCCAACGCCTTTGGGTCCTCTTGGCCTTCAACAGCTTTATTTGGATATGCAATTTGTGATGATATTTGCATCCCAAGGTCGATATTTATCTCGTCATCTGCACCAATCTATCAAAGACATCATCAGTAAGGCAATTGAAGCTGTTGCTGCTACAGGACTTGATCCCAACAGTATATTGCCAGAGGATGAGTGGTTTGTTGAAGTTGCTCAGATTGCCGTAAAGACGTTAACTGGGAAAGCTGCCTTTGATATAGACGATGATGTCGGTAGCCCCTTTGCCGCCGGCGGTTACAACTAA 2289 0.4447 MSMDQMAFVTPRGSLSSIGDSTELEVNPNLTLSDKLRVFKSSSFDPNAFIQTKSRAMNEKEIRHLCVYLVDLKKASAEEMRKSVLANYSAFIRTSKEISDLEGELVSMRNLLVTQAASVHAIAEGCQLSTLVARKENSDMEEILSQKTDLSKTEKWLIEFLETLEVLLAEKRVDEAMAKLEEGKKMAEEITREKLLSPVLFQALEDALADKKKKLADQLAETMGQSSTRNSEIRFTAWALKKLGDGPRAHTLLLNAHKEKLQRKMNGFESTNDGRVKAAGQYTTSLSQLVFSIISRAATDSLTVFGKQEPAYSSELVTWAVGQVENCALLLKKRILASAAATGSLRVAVESVHVCMSHCQLLEANGLALSPVLLKHFRPLVEQALNNNLKRIEQTTAAIALGEEWSLVYAPTSRNSGLAPASSVSSSQPKLSSSAHKFNSLVQELFEDVEPLEILQLDGLAYEGLLRVFNSYINLLINALPGSVETENLEGTSVHKIVKIAETEAQQIAVLANAILLADELIPRAVVKLSHSSKGDESHRKGSDKQQRLPEQRELKKRLQREVDRLRDSFCRQHALELIFNEEGETRLNAMMYLSLDGQGQQPEWFPSTIFQELFAKLTRVATIATDMFVGKDRYATLLLMRLAESVILFLADDQTFWGEVETGPTPLGPLGLQQLYLDMQFVMIFASQGRYLSRHLHQSIKDIISKAIEAVAATGLDPNSILPEDEWFVEVAQIAVKTLTGKAAFDIDDDVGSPFAAGGYN* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0278 762 MobiDBLite consensus disorder prediction 532 554 - -
Amo15g0278 762 Pfam Vps51/Vps67 39 124 - -
Amo15g0278 762 Pfam Exocyst component 84 C-terminal 155 369 IPR032403 -
Amo15g0278 762 Gene3D - 277 383 IPR042560 -
Amo15g0278 762 PANTHER EXOCYST COMPLEX COMPONENT 8 15 757 IPR033961 GO:0000145|GO:0006887
Amo15g0278 762 Coils Coil 201 221 - -
Amo15g0278 762 SUPERFAMILY Cullin repeat-like 148 385 IPR016159 -
Amo15g0278 762 PANTHER EXOCYST COMPLEX COMPONENT EXO84A 15 757 - -
Amo15g0278 762 Coils Coil 173 193 - -
Amo15g0278 762 Coils Coil 549 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0278 Amo-Chr15 10198717 10205483 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0278 K19986 - gmx:100787854 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0278 15 10198717 10205483 Amo15g0278 15 10198717 10205483 ECH