Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0067 ATGGCCGCGGCGGCGCGCGATCTGAGTCTTGTTTCGCAATTTTGCGTTGCCGGAAGCCGTCTAGCTGCTTTGGGAAAGTGTGGGGTTCATCTGTTGAAGAAAGGGAGAAGGGGAAATGCTGGGTTCAAGGTTCGTGCAGCTGTGCAACTGGGTTCTGAGAGTGAAAAGGCAACTAAGCCATTGGAGAAGACTTTTGGGATGGATGTGGTTTCAGAAGTGGGTTTGAGAGAGAAGGGCTTCATGGGTTTGAGGAAGACGAAGCTCGTTTGCACCATTGGCCCTGCTTGCTCCTCACTCAACGATCTGGAGAAGCTTGCATTGGCCGGTATGAACGTTGCGAGGCTCAACATGTGCCATGGCTCCAGGGACTGGCACCGTGACGTCATCAGGAAGATCAAAATGTTGAATGAGGACAAGGGTTTCTCTATTTCTCTCATGATTGATACTGAGGGTAGCCAGATCCATGTTGTTGATCATGGTGCTCCTTCCTCTCTCAAAGTTGAGGAAGATTCTATTTGGCTCTTTACTGCTAAAAATATTGAGGGTTCTCGTCCGTTCACCGTTCAAGCCAACTACGAACGCTTTTCTGAAGGTATTGAAGTGGGCGATGAAGTTGTTATTGATGGTGGAATGGCATGCTTTGTGGTTTTTGAAAAGACTGGAAATGATTTGCATTGCAAGTGCATAGATCCAGGTCTTTTTCTTCCTGGAGCCAAATTTAGTTTCTGGAGAGATGGAAAGCTTGTACGAAGGAATCACAGGCTCCCCACCCTGTCCACGAAGGATTGGGCTGATATTGATTTTGGTATCTCCGAGGGAGTTGACTTCTTTGCCTTGTCCTTTGTCAATCATGCTGATTCTGTTCAACATCTGAAGAACTACCTCTCTACTAAATCAACCAAATCCATCAAAGTATTAGCAAAAATAGAGAGCTTAGAATCCCTTCATAATCTGAAGGAAATAGTACAAGCTTCCGATGGAATCATGGTAGCTCGTGGTGACCTTGGAGTTGAAATACCACTGGAACAGATTCCCACAGTTCAAGAGGATATAATTTACATTTGTAGACAATTAAACAAGCCAGTCATTGTAGCATCTCAACTTCTTGAGTCAATGGTTGAATACCCAACACCAACACGGGCCGAGGTAGCAGATGTTTCTGAAGCAGTTCGACAGTATGCTGATGCTTTGATGTTGTCTGGTGAGTCAGCCATTGGATCATATGGACAAAAGGCTCTTGCAGTCCTAGATATGACAAGCACCAGAATCGAATCATGGGCCAGAGAGGAAAACAGGCAAAGCCTTCTCAATCACTATCAACTTGGAGTTTCTTTACCAGATCGCACTGCCGAGCAGATATGCAATTGTGCTGTTGAAATGGCCAACAATCTTGGTGTTGATGCCATATTTGTGTACACAAAGCATGGATACATGGCATCACTTCTATCACGAAATCGTCCCAATCCTCCAATATTTGCATTCACAAAGGACGAAAGTACCATAATGGCTCTCAACTTAAATTGGGGTGTTGTACCCTTCCAGGTTGACCTGTCAGATGATACAGAATCCAACATCTCAAAATCCATCGAGTTCATGAAATCCAGAGGACTTATCATGCATGGGGATGTTGTTTTGGTGGTGTCGGATGTTGCTCCGACACGCGCAACTCCGATGGCTTCCCAGTCAATTCAGGTGAAGACCATTGTCTGA 1710 0.4532 MAAAARDLSLVSQFCVAGSRLAALGKCGVHLLKKGRRGNAGFKVRAAVQLGSESEKATKPLEKTFGMDVVSEVGLREKGFMGLRKTKLVCTIGPACSSLNDLEKLALAGMNVARLNMCHGSRDWHRDVIRKIKMLNEDKGFSISLMIDTEGSQIHVVDHGAPSSLKVEEDSIWLFTAKNIEGSRPFTVQANYERFSEGIEVGDEVVIDGGMACFVVFEKTGNDLHCKCIDPGLFLPGAKFSFWRDGKLVRRNHRLPTLSTKDWADIDFGISEGVDFFALSFVNHADSVQHLKNYLSTKSTKSIKVLAKIESLESLHNLKEIVQASDGIMVARGDLGVEIPLEQIPTVQEDIIYICRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGQKALAVLDMTSTRIESWAREENRQSLLNHYQLGVSLPDRTAEQICNCAVEMANNLGVDAIFVYTKHGYMASLLSRNRPNPPIFAFTKDESTIMALNLNWGVVPFQVDLSDDTESNISKSIEFMKSRGLIMHGDVVLVVSDVAPTRATPMASQSIQVKTIV* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0067 569 TIGRFAM pyruv_kin: pyruvate kinase 84 566 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo15g0067 569 PANTHER PYRUVATE KINASE 32 568 - -
Amo15g0067 569 PRINTS Pyruvate kinase family signature 141 157 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo15g0067 569 PRINTS Pyruvate kinase family signature 274 288 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo15g0067 569 PRINTS Pyruvate kinase family signature 305 331 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo15g0067 569 PRINTS Pyruvate kinase family signature 332 356 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo15g0067 569 PRINTS Pyruvate kinase family signature 357 381 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo15g0067 569 PRINTS Pyruvate kinase family signature 382 400 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo15g0067 569 PRINTS Pyruvate kinase family signature 401 417 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo15g0067 569 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 78 427 IPR015813 GO:0003824
Amo15g0067 569 Pfam Pyruvate kinase, alpha/beta domain 451 550 IPR015795 -
Amo15g0067 569 ProSitePatterns Pyruvate kinase active site signature. 303 315 IPR018209 GO:0004743|GO:0006096
Amo15g0067 569 Gene3D - 153 255 IPR015806 GO:0004743|GO:0006096
Amo15g0067 569 Gene3D - 419 567 IPR036918 -
Amo15g0067 569 Pfam Pyruvate kinase, barrel domain 84 426 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo15g0067 569 PANTHER PYRUVATE KINASE 32 568 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Amo15g0067 569 Gene3D - 86 416 IPR040442 -
Amo15g0067 569 SUPERFAMILY PK C-terminal domain-like 445 551 IPR036918 -
Amo15g0067 569 SUPERFAMILY PK beta-barrel domain-like 154 237 IPR011037 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0067 Amo-Chr15 2289341 2292389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0067 K00873 - gmx:100780644 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0067 15 2289341 2292389 Amo15g0067 15 2289341 2292389 ECH