Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0066 ATGGCAACTCTTTCTGCTCTTTCCTATTCTTCGATCCCATACAGATACAGATACAGTTGCAGATGCGGGAGAAGCCTCTTCGTTTTTCCACTCAGCCACCGAAACGGCCATCTTTCCGTTTCTCTGCGCTCAAAACATGCTTCGTTGTTGAAACCCCTCAACTGCTCCCTGAAACAAGACGACTACCAGCACCAAACCCACTCCGCTGACTCTAACTCTGACTCTGACTCTGACTCTGCTACTGCGGTTGCCGTTTCCCCTGATGGGAATCCTACGAATGAGAGCCACAAAGAAGAAGATGGGGAGCAAAAGGAGAAACAAGAACAGGAAACGGATTGGAAGACGGATGAGGAGTTCAAGAAGTTCATGGGCAACCCTTCGATCGAGGCCGCCATCAAGCTTGAGAAGAAGAGGGCCGACACCAAGCTCAAGCAGCTAAGCAGAGAATCAAGCGGTGCTACTAATCCCCTTGTGGCTCTTCTGAATACCTTACGCCGTGATACTCTAACCAAGGAAAAGGAGAGGTTGGAGAAAGCAGAGCAAACCTTCAGGGCTCTTGATCTTAACAAGTTGAAGAGTTGCTTTGGCTTTGACACTTTCTTTGCAACCGATGTTCGAAGGTTCGGAGATGGAGGCATCTTCATCGGCAACTTGAGGAGACCCATCGATGAAGTCATTCCCAGGTTGGAGAAGAAGCTCTCCGATGCTGCTGGCCGTGAGGTCGTCCTTTGGTTCATGGAAGAGAAAACAAATGACATTACCAAGCAGGCTTGTGTGGTGCAACCCAAAGCAGAAATAGATCTCCAATTTGAGTCAACTAAGCTGAGTAATCCCTTGGGCTATCTTAGCGCCATTGCATTATCTGTTACTACCGTTGGGACAATTGCTCTCATGAGTGGCTTCTTCCTCAAACCGGACGCAACATTGGATGATTATATAGCTAATGTTGCACCTTTGTTTGGTGGGTTCTTATCTATTCTAGGCGTTTCTGAGATAGCAACGAGAGTAACGGCAGCTCGTTATGGTGTGAAACTGAGCCCGTCGTTCTTGGTTCCATCAAATTGGACAGGGTGCTTGGGAGTGATGAACAACTACGAAAGCCTGCTCCCAAACAAGAAAGCACTGTTTGATATTCCAGTGGCCCGAACAGCGAGTGCATATTTGACATCACTAGTGCTTGCAGTAGCGGCATTCGTAGCAGATGGAAGCTTCAATGGAGGGGAGAATGCACTGTACATAAGGCCGCAGTTCTTCTACAACAACCCGTTGCTGTCATTCATCCAGCTGGTAATAGGGCCGTACACGGATGATCTTGGGAATGTGCTGCCGTACGCGGTGGAGGGAGTGGGAGTGCCTGTGGATCCGCTTGCATTTGCGGGGCTGTTGGGGATGGTGGTGACGTCATTGAACCTCTTGCCATGCGGGAGACTAGAGGGAGGGCGCATTGCGCAGGCCATGTTTGGGAGAAGCACAGCTGCAATCTTGTCTTTTGGGACGTCGCTGTTGCTTGGGATCGGCGGGCTGAGTGGGAGCGTTCTGTGTCTGGCATGGGGCTTGTTTGCAACCTTCTTGAGGGGAGGAGAAGAGATGCCTGCAAAGGACGAGATTACCCCTCTCGGGGAATCCAGATTTGCTTGGGGTATTGTCCTTGCGCTCATCTCTTTCCTCACCCTCTTCCCCAACGGCGGCGGCACTTTCTCCTCTTCCTTCCTCTCTGCTCCCTTCTTCCGGGGAGACATCTAG 1743 0.506 MATLSALSYSSIPYRYRYSCRCGRSLFVFPLSHRNGHLSVSLRSKHASLLKPLNCSLKQDDYQHQTHSADSNSDSDSDSATAVAVSPDGNPTNESHKEEDGEQKEKQEQETDWKTDEEFKKFMGNPSIEAAIKLEKKRADTKLKQLSRESSGATNPLVALLNTLRRDTLTKEKERLEKAEQTFRALDLNKLKSCFGFDTFFATDVRRFGDGGIFIGNLRRPIDEVIPRLEKKLSDAAGREVVLWFMEEKTNDITKQACVVQPKAEIDLQFESTKLSNPLGYLSAIALSVTTVGTIALMSGFFLKPDATLDDYIANVAPLFGGFLSILGVSEIATRVTAARYGVKLSPSFLVPSNWTGCLGVMNNYESLLPNKKALFDIPVARTASAYLTSLVLAVAAFVADGSFNGGENALYIRPQFFYNNPLLSFIQLVIGPYTDDLGNVLPYAVEGVGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQAMFGRSTAAILSFGTSLLLGIGGLSGSVLCLAWGLFATFLRGGEEMPAKDEITPLGESRFAWGIVLALISFLTLFPNGGGTFSSSFLSAPFFRGDI* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0066 580 MobiDBLite consensus disorder prediction 92 119 - -
Amo15g0066 580 PANTHER ZINC METALLOPROTEASE EGY1 54 578 IPR044838 -
Amo15g0066 580 PANTHER ZINC METALLOPEPTIDASE EGY3, CHLOROPLASTIC-RELATED 54 578 - -
Amo15g0066 580 MobiDBLite consensus disorder prediction 61 91 - -
Amo15g0066 580 MobiDBLite consensus disorder prediction 61 119 - -
Amo15g0066 580 Coils Coil 169 189 - -
Amo15g0066 580 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0066 Amo-Chr15 2283057 2285025 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0066 K25380 - mnt:21386890 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0066 15 2283057 2285025 Amo15g0066 15 2283057 2285025 ECH
Amo05g2085 05 45624985 45628092 Amo15g0066 15 2283057 2285025 hybridization