Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0039 ATGGAGAACTCGGGTTCAGGTGCAATCGATTGTGGCGTTGGATCGATTGTATGGGTCCGAAGAAGAAACGGGTCGTGGTGGCCGGGTCAAATACTCGGTCCTCATGAACTTTCGGGTTCTCATCTTACTTCTCCCCGATCAGGAACTCCCGTTAAGCTTCTTGGCAGGGAAGATGCCAGCGTAGATTGGTACAATCTGGAGAAATCCAAACGTGTGAAGCCATTTCGATGTGGTGAGTTCGATGGATGTATTGAAAGGGCAGAGTCTTCCCAGGGTATGCCCTTAAAGAAAAGGGAAAAGTATGCGCGCCGAGAAGATGCCATTCTTCATGCTCTTGAACTTGAGAGGCAAATGCTGAAGAAGCAAGAGAAATTAGGAGCTGGGCAAATGGGTGTAGGTTGCCGAGCAAAGAGAAGCAGATGTGTGTATTTACCACCTCAGTCTAGTGATTCTATGGATTATAAAGAGACTCATGTTGAGATGTCATCTTCTCAATTTGGGAAGGAGTATCCTTATCGTAGTTCTTTTGCTGAGGAGGGTGAATCTGCCTTTGTAGATGATGTTCAATCTGATTCTTCTGAAACTGATTCAGCTAATTCTGGTTCAGATTCCTCGGAAACAGAAGCAGACAAGGATGAAGAGATGACCATTTCAGAAACGGGTCAAGATGCTGAAGAGGAAGAAAGCACTAGTAGTGAGGATCTTGATGAATTGGCAATATCTGCTGACATGCCTCTCCTGTATCCTCGTGAACCTTCAACACGTAATGAAGCTGTATCCAAATGGCAATTAAAAGGAAAGAGGAACAGTCGTAGTTTTGTGAAGAGGTCTGTTGGTGCTCCTGATGGAAAAGGAGTTCGGTATGGAGCAGATGTTGAGCAAGGAAGTCATATAGGCCATAAGAGATTAGGTCCTAATTCACATTACTACAAAAATGGTCTAAGTGATGTCTTTGATGACACCGAACAAACGTTTGGATTCGAAGATGAATTCTCTCTAACTCCTAGAGCAGCATCAAAGGGTCAAACCAAAGTTCGTCATGGTGTTGATTGGGATGTCTGGGGTTGGGAAGATCAGCCTGCTACGAGAGGATATTGGGATTATAAAGGGTTTGCTCCAGGATATGGTGATCGCTATCATTATGATGGGAGGATGAGACCATTTCTGGTAGATGTAGACCTGAAGGTTCAAGCTAGCTATCGCAAAGAGCCTGTTCCCATTGTTTCTCTCATGAGTAAGTTAGATGGTAGGGCAATAATCGGACATCCGATCCAAATTGAAACCCTGAAGGATGGTTCATCAGATATGCTATTTCCTGCATTTGATGATTTCAATAATGATGGAATTGGTATTGAGGGAAGTAGTGTGCTTCCACCAGCTTGGAGGACTGCAAGGAGAACAGCGAATTTTCGTGTTCCTCGTCCACATTTATCATCATCGAATGGTGCTGAAGCTGCTTCAGATTTTTCCTTAGATCAAGAAAGATTTGAATATAGAAGATTAAATGCTGGAAGTTCCAGCTACAAGGGAAGCTTTTCCATTTCCAGGAAGAGTGGCCGTAACAGTCCCGGGCCTTCAATTGACAAGAAGTCAATGAAAAAGGGGTCAAAGAAAGTGAGCTTATCGTCTAGCCAGAAAACTAGAACTCTGTCCTCATTGTCTAGTGAACATAATCATCATAGTAAAAAACCTTTAATTGATAGCAGTTTTTATCAAACAAATAGGTTGATTAAACCAGAGGTCTCTGGGCTCACTACTGTAGCTTGCATACCAGTTAAATTGGTATTTAGTAGATTACTTGAGAAGATTAATAGGCCTCCTTTAAAAGCAGCTAGTAATGCGGCTTTGTTGAATAGTGATGTGGAGAGAAATTCATAG 1878 0.4276 MENSGSGAIDCGVGSIVWVRRRNGSWWPGQILGPHELSGSHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKPFRCGEFDGCIERAESSQGMPLKKREKYARREDAILHALELERQMLKKQEKLGAGQMGVGCRAKRSRCVYLPPQSSDSMDYKETHVEMSSSQFGKEYPYRSSFAEEGESAFVDDVQSDSSETDSANSGSDSSETEADKDEEMTISETGQDAEEEESTSSEDLDELAISADMPLLYPREPSTRNEAVSKWQLKGKRNSRSFVKRSVGAPDGKGVRYGADVEQGSHIGHKRLGPNSHYYKNGLSDVFDDTEQTFGFEDEFSLTPRAASKGQTKVRHGVDWDVWGWEDQPATRGYWDYKGFAPGYGDRYHYDGRMRPFLVDVDLKVQASYRKEPVPIVSLMSKLDGRAIIGHPIQIETLKDGSSDMLFPAFDDFNNDGIGIEGSSVLPPAWRTARRTANFRVPRPHLSSSNGAEAASDFSLDQERFEYRRLNAGSSSYKGSFSISRKSGRNSPGPSIDKKSMKKGSKKVSLSSSQKTRTLSSLSSEHNHHSKKPLIDSSFYQTNRLIKPEVSGLTTVACIPVKLVFSRLLEKINRPPLKAASNAALLNSDVERNS* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0039 625 MobiDBLite consensus disorder prediction 505 525 - -
Amo15g0039 625 MobiDBLite consensus disorder prediction 186 204 - -
Amo15g0039 625 MobiDBLite consensus disorder prediction 505 566 - -
Amo15g0039 625 SUPERFAMILY Tudor/PWWP/MBT 12 116 - -
Amo15g0039 625 MobiDBLite consensus disorder prediction 207 234 - -
Amo15g0039 625 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 1 623 - -
Amo15g0039 625 Pfam PWWP domain 14 94 IPR000313 -
Amo15g0039 625 MobiDBLite consensus disorder prediction 184 237 - -
Amo15g0039 625 Gene3D - 5 126 - -
Amo15g0039 625 ProSiteProfiles PWWP domain profile. 13 68 IPR000313 -
Amo15g0039 625 MobiDBLite consensus disorder prediction 537 552 - -
Amo15g0039 625 PANTHER T17B22.17 PROTEIN-RELATED 1 623 IPR044679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0039 Amo-Chr15 1818912 1823253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0039 - - gmx:102663865 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0039 15 1818912 1823253 Amo15g0039 15 1818912 1823253 ECH
Amo05g2298 05 49244983 49249243 Amo15g0039 15 1818912 1823253 hybridization