Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1790 ATGCGCACAATATTRCATGCAACATCAGCAAGTCAACCAAGAGCAGATGTGGCATACTGCATTCACAAACTTTCCAAAAGGCTTTACAAGACAAAAAACTGGATAGTTGCTATAAAGACATTGATAGTGATGCATAGGTTATTGAGAGAGGGTGATCCTACTTTCAGAGAAGAGCTCCTAAACTACACACGCAGGGGACACTTTCTCCAAATATCCAATTTCAAAGATGACACCACTCCTCAAGCTTGGGATTGTTCTGCATGGGTTCGAACCTATGCACTTTTTCTACAAGAAAGACTTGAATGCTTTAGAACACTCAAATACGACATTGAAACAGAGCGTTTCGTAAAATCACCAACTTCTTCAGCTAAACCACTTACAAGAACTCGGTCTTTGGGTGCTGCAGAATTGTTGGAGCAGTTACCTGCATTGCAGCAACTCCTGCAACGCCTTATAGGTTGCCAGCCTGAAGGATGCGCTTATGGAAATTATCTTGTACAATATGCATTGGCCCTGGTATTGAAAGAGAGCTTCAAAATATATTGTTCATTGAATGATGGAATCATCAATCTTGTGGATGTGGCTGAGCATCTTGCTCAGTTTTATGAATACTGCAAAGGGTTGGAGATTGCAAGGAATTTCCAATTTCCATGTCTAAGACAGGAACAGCCACCCCCCTCTTTCCTTGCAACAATGGAAGAATACATTGGAGAAGCACCACAAACTAGCTCTGTTCATCAAAGACTGGAATATCGTGAAGCTGATCTATCACCTTCTAGAGAAGATCCTCCAGAAACCGACGAGCCYGAAGAGCCTCAAGAAACTGAAGGAGAAGAAGAGAATGAGGAAGAACCAGTTGTCAACGGAGAGCCAAATCCTGTGGAAGTGGAAGAGGCTGCTCCGCTGATATCGAATAATTGGATCGATGATGACTTGCTGGGTCTGCGTGAAATAAAYCCTCAAGCTGTTGAACTTGAAGAAAGAAATGCTTTGGCCCTTGCAATTGTACAACCTGGTGGAAATAATTCAAACAATCTTGCTTTGAACAACATTGGTGACACTACTGGTTGGGAACTAGCACTGGTTACAGCACAAAGCAACCATACTAGCCAAGCGCCAGATCRAAATATGGCTGGTGGATTTGACAAGTTATTACTAGATAGTTTATATGAAGATGAGAATGCAAGAAGACAACTYCAGCTCCAAAATGCAGGTTATGGATATGGTGGAAATGGAATGGCCATACAAAACCCATTTGAAAATGATAATGATCCATTTGCAGTGTCCAACAACATAGCACCCCCAACCAGTGTTCAATTGGCATTGCAACAACAGCAACAACAAACGCTGTTCCAACAACAACAGAACAATAACATGATGATGACGCCTTACCAGCAGCAACCATATTACAATCCATTTGGAGACCCTTTACCAGTGCCTAACTATGCATATGGTTCTACACCAGCACAGGGAAATTATAATTTAATGTAG 1491 0.4172 MRTILHATSASQPRADVAYCIHKLSKRLYKTKNWIVAIKTLIVMHRLLREGDPTFREELLNYTRRGHFLQISNFKDDTTPQAWDCSAWVRTYALFLQERLECFRTLKYDIETERFVKSPTSSAKPLTRTRSLGAAELLEQLPALQQLLQRLIGCQPEGCAYGNYLVQYALALVLKESFKIYCSLNDGIINLVDVAEHLAQFYEYCKGLEIARNFQFPCLRQEQPPPSFLATMEEYIGEAPQTSSVHQRLEYREADLSPSREDPPETDEPEEPQETEGEEENEEEPVVNGEPNPVEVEEAAPLISNNWIDDDLLGLREINPQAVELEERNALALAIVQPGGNNSNNLALNNIGDTTGWELALVTAQSNHTSQAPDXNMAGGFDKLLLDSLYEDENARRQLQLQNAGYGYGGNGMAIQNPFENDNDPFAVSNNIAPPTSVQLALQQQQQQTLFQQQQNNNMMMTPYQQQPYYNPFGDPLPVPNYAYGSTPAQGNYNLM* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1790 496 SMART enth_2 1 110 IPR013809 -
Amo14g1790 496 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 2 194 - -
Amo14g1790 496 Gene3D ANTH domain 124 194 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Amo14g1790 496 SUPERFAMILY GAT-like domain 128 238 - -
Amo14g1790 496 CDD ANTH_N 1 103 - -
Amo14g1790 496 MobiDBLite consensus disorder prediction 248 263 - -
Amo14g1790 496 SUPERFAMILY ENTH/VHS domain 1 111 IPR008942 -
Amo14g1790 496 MobiDBLite consensus disorder prediction 264 286 - -
Amo14g1790 496 PANTHER CLATHRIN ASSEMBLY PROTEIN 2 194 IPR045192 GO:0048268|GO:0072583
Amo14g1790 496 PANTHER CLATHRIN ASSEMBLY PROTEIN 195 481 IPR045192 GO:0048268|GO:0072583
Amo14g1790 496 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 195 481 - -
Amo14g1790 496 Gene3D - 1 110 IPR008942 -
Amo14g1790 496 Pfam ANTH domain 195 236 IPR011417 GO:0005543
Amo14g1790 496 Pfam ANTH domain 1 193 IPR011417 GO:0005543
Amo14g1790 496 MobiDBLite consensus disorder prediction 239 296 - -
Amo14g1790 496 ProSiteProfiles ENTH domain profile. 1 110 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1790 Amo-Chr14 37397604 37404925 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1790 K20044 - gmx:100783084 572.392