Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1769 ATGAACATGTTCTACGCTAGAAGACCATTCTCCTCCTCTTCTTCTTCATGCTCCTCAAAGAACCATTCACTCCAAACGTTACTGAAGCGTGGATTCACACCAACCCTGAAATCCATCAACATATTCCTCCTCTCCCTCCTCCGCCACCGCAAGTTCAACCTCATCATCCACCTCTTCACCWCTGCCACACTCATCCCCACTAACCCTACCACCCACTCCATCCTCACATGGGCACTCCTCCATTCTAGAAGCTTCCAAGATGCCGAGAATCTCATCTTAACTCACTTCACCCATTCCCATCCTCGCATCTGGGACACACTCATCCGTACCCACCATGACCCTAATAGGGCACTCTTTCTTCTACGCTATTGCCTCCAAAACGGTGCCGTTTTGCCCGCTCCTCTCACTTTCTCTTCTCTTATTCACAGGCTCTCTTCTCAGGGGGACCTAGGCATGGCAATGGAGGCACTGGAGATCATGACAGATCATAGGGTAAGGTACCCTTTTGATGATTTTGTTTGTAGCTCCGTGATTTCTGGGTTTTGTAGGATTGGGAAGCCTGAACTTGCGTTAGGGTTTTATGACAATGCTGTGGGTTCTGGGGCACTGTTGAGGCCCGGCTTGGTTACTTTAACTGCAATTGTTGGTGCACTTGTTAGGTTGGGGAGGCTTGATGAGGTTTGTGGTTTGGTTAGGAGGATGGAGGAGGATGGGATTGGTTTGGATGTTGTTTTGTATAGTGTTTGGGTTTGTGGGTATGTTAAAGGGAAYGACTTGGTGGAGGTTTTTCGAAAGATGAGGGAAATGGTGGTGGTGAAGGGTATCGATCATGATCATGTGAGTTATACTATACTCATTGATGGGTTTTCTAAGTTAGGCGATGTGGAGAAGTCATTTGGGATCTTGGCTAAGATGATAAAGGAAGGGAAGAGACCCAATAAGGTCACTTACACTGCAATAATATCTGCTTATTGTAAGAAGGGTAAAGTTGAGGAAGCACGTGGTGTTTTTGASAGGATAGGTGAGTTGGGAATTGAGTTGGATGAGTTTGTGTATGCAGTTTTGATTGATGGATATTGTYGGATTGGAGATTTTGGTAGTGTCTTTAAGCTATTTGTTGAAATGGAGAAAAGAGGGGTTAGTCCTAGTGTTGTTACGTATAATACCATAATAAATGGTTTGTGCAAGTTCGGGAGGACGTCTGAGGCGGATGAGTTATCRAAAGATGTGGCTGCAGATGTGATTACGTACAGCACGTTGTTGCAYGGTTATACYGAAGAAGAGAACACTCYGGGGATTTTGCAGACAAAGAGGCGACTAGAAGAAGCTGGAATCGCCATGGATATCATAATGTGCAATGTGCTGATCAAAGCATTGTTTATGATGGGGGCTTTTGAAGATGTTTATGCTCTTTACAAAGGAATGCCGGAAATGGGCCTGGTTCCGAATTCTGTTACTTATTGCACAATGATTGATCAGTATTGCAAGGTAGGTAGAATTGACGAGGCACTTGTGGTATTTGATGACTTCAGAAAAACATCATTCTCTTCACCTGTATGCTACACTAGTATTATTCATGGACTCTGCAAGAAGGGTATGGTAGAAATGGCCATTGAGGCATTAGCCGAACTCAATGATAAAGGACTGGAGTTAAGTAGATATACATTTAGGATGTTAATGAGGACACTTCTCACTGAAAAGGGTGCAAAAGAGGTTTTAGATTTAGTTTACACAATGGAAGGATTGGGCCAAGACTTATATGAGTCAGTATGTAATGATGCAATCTTTTTATTATGCAGAAGAGGATTTCTTGAGGATGCATATCGCTTGTGCTTGATGATGAGAAAGACAGGTTTATACGTTACAAGAAATTCTTATTATTCTGTTTTAAGAAGCTATCTTAGTAACAGGAATAGGGAGCACATGCTACCCCTATTGAATATCTTTCTAAAAGAATATGGCCTAGTTGATCCAATGATGCGAAGGATACTAGCATGCTACCTATGCTTAAAAGATATCCATAATCCCCTTCAATTTATGGGAAAAACAATCTCTCTTCCTGTCGCCATCTTCAGGATTCTGATAAAGGAAGGTAGAGCTTTAGATGCATATAAGCTTGTGGTAAAGACTCAAGATAGTTTACAAGTCATGTATGCTGATTATGCCATTCTGATTGATGCCTTATGCAAGGGAGGATATCTCAATAAAGCATTGGATCTTTGTGCCTTCGTTGAAAAGAAAGGGATCACTTTGGACATAGTTGTATATAATTCTATAATAAATGGATTGTGCCATGAGGGACGTCTTATTGAAGCATTTCGGCTATTTGATTCATTGGAGAAACTTAATTTGATACCATCTGAAATAACTTATGCCACATTAATTTATGCACTAAGTAGGGAGGGATATCTGGTAGATGCTGAGCATGTTTTCAGTAAAATGGTYCTGAAGGGCTTTCAACCAAAAACACAAGTTTATAATTCACTACTTGAGGGTATTTCAAAGTTTGGTCAATTAGAGAATGCGCTCGAGCTTCTAAACGATTTGGAGACAAAATATATTGAGCCTGACAGCTTGACGGTTAGTGCTGTCATAAATTGCCATTGCCAAAAGGGCAACATGGAAGGAGCACTTCAATTCTATTATAAGTTCAAGAGGAAGGATGTATCACCTGATTTTTTTGGGTTCTTGTACTTGATAAGAGGCTTATGTTCAAAGGGACGGATGGAAGAAGCTAGGAGTGTCTTGAGAGAAATGCTCAAATCGAAGAATATTGAAGAGATAATTAACATAGTTAACAATGAGGTTGATAATGAGTCAATAGGTGGCTTTCTTGCCATTTTGTGTGAGCAAGGAAGTATTCAAGAAGCCCTTGCAGTTCTCAATGAAATTGCAAGCACGCTTTATCCTGTTCTAAGGTTATCTACATATAATCAAGGAGCTCACGCACAGAGGAACATTTCTGAGCTGAACGCTGGTTTACAATCTTCAAGGCGTCTATCCTCCTCTTGTAGAACTGGTTTGGATTTTGGATCTTGTGATGCTAGCGATGAAAGTGATCTTACAATAAATAATGATAGTCATGTGACAAGGTCCCGGCCACTCAATTTCGACTTCTATTATTCCATGATTGCCACACATTGTGCCAAAGGGGAGCTACAGAAAGCTAATCAAGTAGCTAAGGGAATGCTTTCCCACCTAAGTCGAGGAGCTGAACATAAGAAAGAAGAGAGAAAATGA 3240 0.4114 MNMFYARRPFSSSSSSCSSKNHSLQTLLKRGFTPTLKSINIFLLSLLRHRKFNLIIHLFTXATLIPTNPTTHSILTWALLHSRSFQDAENLILTHFTHSHPRIWDTLIRTHHDPNRALFLLRYCLQNGAVLPAPLTFSSLIHRLSSQGDLGMAMEALEIMTDHRVRYPFDDFVCSSVISGFCRIGKPELALGFYDNAVGSGALLRPGLVTLTAIVGALVRLGRLDEVCGLVRRMEEDGIGLDVVLYSVWVCGYVKGNDLVEVFRKMREMVVVKGIDHDHVSYTILIDGFSKLGDVEKSFGILAKMIKEGKRPNKVTYTAIISAYCKKGKVEEARGVFXRIGELGIELDEFVYAVLIDGYCXIGDFGSVFKLFVEMEKRGVSPSVVTYNTIINGLCKFGRTSEADELSKDVAADVITYSTLLHGYTEEENTXGILQTKRRLEEAGIAMDIIMCNVLIKALFMMGAFEDVYALYKGMPEMGLVPNSVTYCTMIDQYCKVGRIDEALVVFDDFRKTSFSSPVCYTSIIHGLCKKGMVEMAIEALAELNDKGLELSRYTFRMLMRTLLTEKGAKEVLDLVYTMEGLGQDLYESVCNDAIFLLCRRGFLEDAYRLCLMMRKTGLYVTRNSYYSVLRSYLSNRNREHMLPLLNIFLKEYGLVDPMMRRILACYLCLKDIHNPLQFMGKTISLPVAIFRILIKEGRALDAYKLVVKTQDSLQVMYADYAILIDALCKGGYLNKALDLCAFVEKKGITLDIVVYNSIINGLCHEGRLIEAFRLFDSLEKLNLIPSEITYATLIYALSREGYLVDAEHVFSKMVLKGFQPKTQVYNSLLEGISKFGQLENALELLNDLETKYIEPDSLTVSAVINCHCQKGNMEGALQFYYKFKRKDVSPDFFGFLYLIRGLCSKGRMEEARSVLREMLKSKNIEEIINIVNNEVDNESIGGFLAILCEQGSIQEALAVLNEIASTLYPVLRLSTYNQGAHAQRNISELNAGLQSSRRLSSSCRTGLDFGSCDASDESDLTINNDSHVTRSRPLNFDFYYSMIATHCAKGELQKANQVAKGMLSHLSRGAEHKKEERK* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1769 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 857 891 IPR002885 -
Amo14g1769 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 278 312 IPR002885 -
Amo14g1769 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 752 786 IPR002885 -
Amo14g1769 1079 PANTHER FERTILITY RESTORER-LIKE 63 564 - -
Amo14g1769 1079 PANTHER FERTILITY RESTORER-LIKE 694 749 - -
Amo14g1769 1079 PANTHER ATPASE EXPRESSION PROTEIN 3 694 749 - -
Amo14g1769 1079 PANTHER ATPASE EXPRESSION PROTEIN 3 63 564 - -
Amo14g1769 1079 PANTHER ATPASE EXPRESSION PROTEIN 3 745 1068 - -
Amo14g1769 1079 Pfam PPR repeat 136 163 IPR002885 -
Amo14g1769 1079 Pfam PPR repeat 173 196 IPR002885 -
Amo14g1769 1079 Pfam PPR repeat 721 749 IPR002885 -
Amo14g1769 1079 Pfam PPR repeat 209 239 IPR002885 -
Amo14g1769 1079 Pfam PPR repeat family 519 563 IPR002885 -
Amo14g1769 1079 Pfam PPR repeat family 348 396 IPR002885 -
Amo14g1769 1079 Pfam PPR repeat family 752 799 IPR002885 -
Amo14g1769 1079 Pfam PPR repeat family 821 870 IPR002885 -
Amo14g1769 1079 TIGRFAM PPR: pentatricopeptide repeat domain 754 787 IPR002885 -
Amo14g1769 1079 TIGRFAM PPR: pentatricopeptide repeat domain 351 384 IPR002885 -
Amo14g1769 1079 TIGRFAM PPR: pentatricopeptide repeat domain 385 406 IPR002885 -
Amo14g1769 1079 TIGRFAM PPR: pentatricopeptide repeat domain 315 349 IPR002885 -
Amo14g1769 1079 TIGRFAM PPR: pentatricopeptide repeat domain 280 313 IPR002885 -
Amo14g1769 1079 TIGRFAM PPR: pentatricopeptide repeat domain 209 242 IPR002885 -
Amo14g1769 1079 TIGRFAM PPR: pentatricopeptide repeat domain 899 923 IPR002885 -
Amo14g1769 1079 TIGRFAM PPR: pentatricopeptide repeat domain 860 892 IPR002885 -
Amo14g1769 1079 TIGRFAM PPR: pentatricopeptide repeat domain 789 821 IPR002885 -
Amo14g1769 1079 TIGRFAM PPR: pentatricopeptide repeat domain 451 483 IPR002885 -
Amo14g1769 1079 TIGRFAM PPR: pentatricopeptide repeat domain 485 515 IPR002885 -
Amo14g1769 1079 TIGRFAM PPR: pentatricopeptide repeat domain 519 551 IPR002885 -
Amo14g1769 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 348 382 IPR002885 -
Amo14g1769 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 170 204 IPR002885 -
Amo14g1769 1079 Pfam PPR repeat 309 337 IPR002885 -
Amo14g1769 1079 Pfam PPR repeat 888 919 IPR002885 -
Amo14g1769 1079 Pfam PPR repeat 478 508 IPR002885 -
Amo14g1769 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 207 241 IPR002885 -
Amo14g1769 1079 Gene3D Tetratricopeptide repeat domain 801 1014 IPR011990 GO:0005515
Amo14g1769 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 313 347 IPR002885 -
Amo14g1769 1079 Pfam Pentatricopeptide repeat domain 408 458 IPR002885 -
Amo14g1769 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 483 517 IPR002885 -
Amo14g1769 1079 Gene3D Tetratricopeptide repeat domain 257 341 IPR011990 GO:0005515
Amo14g1769 1079 Gene3D Tetratricopeptide repeat domain 516 586 IPR011990 GO:0005515
Amo14g1769 1079 Gene3D Tetratricopeptide repeat domain 410 515 IPR011990 GO:0005515
Amo14g1769 1079 Gene3D Tetratricopeptide repeat domain 342 409 IPR011990 GO:0005515
Amo14g1769 1079 PANTHER FERTILITY RESTORER-LIKE 745 1068 - -
Amo14g1769 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 787 821 IPR002885 -
Amo14g1769 1079 Gene3D Tetratricopeptide repeat domain 18 204 IPR011990 GO:0005515
Amo14g1769 1079 Gene3D Tetratricopeptide repeat domain 682 800 IPR011990 GO:0005515
Amo14g1769 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 822 856 IPR002885 -
Amo14g1769 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 892 922 IPR002885 -
Amo14g1769 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 383 413 IPR002885 -
Amo14g1769 1079 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 448 482 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1769 Amo-Chr14 36607734 36617281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1769 592 962 Glycosyltransferase AT1G05670 25.401 5.60e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1769 - K17964 gmx:100783405 1422.53