Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1600 ATGGCCACACATCTAGAATGCTTCTTCCTCAAACTTGAGCCCCTTCTCACAATGGCAAGAACATTTCTAGTTTGGTTCTTGTGTCTTGGGGTGCCTTGTTTCTTTGTAATTATTGATGGTGGAGTTTATGGAGATCATCAGAACTTGCATCCAAGAACCATTTCTGGTGCCAATCACTACCATAAAGATATAAGAAGATTACAAGCCTTTAAGGCCTCTCTTACTAGACATGCTTCTGTTGCTTCAACACCTTCTTCATTTTCATCCTCTTCTGCTTCTTCCCCTTTGCTATCTGAGGGTGTGAACAATCCACGTGTATACCACGTGACATCGTATGGGGCAGATCCAAGTGGGAATTCAGACAGCACAGAAGCAATTCTTGCAGCCATAGCAGATGCAGCCAAGGTTTCAAGTCAAGGACAGTTGATGCAGGGCATCACTGATCTTGGAGGTGTCCATGTTGATCTTGAGGGTGGTAGCTACCTCATCAGCCGTCCACTGCGCTTGCCGGCCGCCCGTCTAGGGAATCTCATGATACATGGTGGAACTATAAGAGCCTCAAATAACTTTCCAGAAGATGGGTACCTCATTGATTTGTCATCAACCTCTTCTTCTTCTTCTTCTAATAATAATAATAATAATAATAATAATAATGAGAACAATGGAGCTAACTCAGAGAGTTCCCGTTCTTCACGCTACAATTTTGAGTACATAAGCTTCAAGGACCTCTTGTTAGACTCAAACTTCAGAGGTGGGGGCATTTCAGTAATTAACTCACTCAGAACTAACATAGACAATTGTTACATTACACACTTCACCACAAATGGAATTTTAGTCCAAAGTGGTCATGAGACATACATTAGAAACACTTTTCTTGGCCAGTACGTAACCGCTGGAGGTGATAAAAATGAAAAGAATTTCTCCGGGACCGGAATAAGTCTCCTCGGCAACGATAACGCCGTCACGGATGTTGTCATCTTCTCTGCAGCTATAGGAATAATGGTAACGGGTCAGGCCAACACGTTCTCCGGCGTGCATTGTTACAATAAGGCCACCGGATTCGGAGGGACCGGGATATATCTGAAGCTGCCGGGGCTAACACAGACAAGGATTGTGAATTCTTACATGGATTACACGAGTATCGTCGCCGAGGATCCGGTCCAGCTCCATGTCTCTAGCAGTTTCTTCCTTGGTGATGCCAACATTGTCCTTAAATCAGTGAAAGGTGTTGTGAATGGAGTCAGCATTGTTGATAACATGTTTTCAGGGTCCAGTTCTGGGGTGGAGATTGTTCAATTGGACCAATCAAACAACAGTTTCAACCAAATTGATCAAGCTATTGTTGATAGGAACATTGTGAGGGGAATGAATTTGAAGGCCACAGTGGCAAAAATGTCAATTCGAGGGAATGGAACATTATGGAATGTTGATTTTAGTAATGTTCTGCTTTTTCCAAACCTTATCAGAAATGTTCAGTACTCATTAAGCTCTAGTGGTGGAACATTCCCTAATCATGCTTTGAGGAATGTATCTGAGAACAAGGTTGTGATTGAAACAAGTGAAGCAGTGGATGCAAATGTTTTTGTTACTGTGGATCAGAGTATGGTAAATTGA 1614 0.4257 MATHLECFFLKLEPLLTMARTFLVWFLCLGVPCFFVIIDGGVYGDHQNLHPRTISGANHYHKDIRRLQAFKASLTRHASVASTPSSFSSSSASSPLLSEGVNNPRVYHVTSYGADPSGNSDSTEAILAAIADAAKVSSQGQLMQGITDLGGVHVDLEGGSYLISRPLRLPAARLGNLMIHGGTIRASNNFPEDGYLIDLSSTSSSSSSNNNNNNNNNNENNGANSESSRSSRYNFEYISFKDLLLDSNFRGGGISVINSLRTNIDNCYITHFTTNGILVQSGHETYIRNTFLGQYVTAGGDKNEKNFSGTGISLLGNDNAVTDVVIFSAAIGIMVTGQANTFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHVSSSFFLGDANIVLKSVKGVVNGVSIVDNMFSGSSSGVEIVQLDQSNNSFNQIDQAIVDRNIVRGMNLKATVAKMSIRGNGTLWNVDFSNVLLFPNLIRNVQYSLSSSGGTFPNHALRNVSENKVVIETSEAVDANVFVTVDQSMVN* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1600 537 PANTHER POLYGALACTURONASE QRT3 18 210 IPR039279 GO:0004650
Amo14g1600 537 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 18 210 - -
Amo14g1600 537 MobiDBLite consensus disorder prediction 201 228 - -
Amo14g1600 537 PANTHER POLYGALACTURONASE QRT3 217 535 IPR039279 GO:0004650
Amo14g1600 537 SUPERFAMILY Pectin lyase-like 105 293 IPR011050 -
Amo14g1600 537 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 217 535 - -
Amo14g1600 537 SMART pbh1 259 281 IPR006626 -
Amo14g1600 537 SMART pbh1 411 432 IPR006626 -
Amo14g1600 537 SMART pbh1 316 337 IPR006626 -
Amo14g1600 537 SMART pbh1 174 199 IPR006626 -
Amo14g1600 537 Gene3D - 106 537 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1600 Amo-Chr14 29119404 29123125 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1600 - - ahf:112741808 947.962