Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1376 ATGGGTATCTTTACACACGAATTTGCTACTCCATCTTCTGTGGCTCCTGCTAGGCTTTACAAAGCTATGGCATTAGATTTTCATAATCTCTTCCCAAAGATTGTAGATTCTATTCAGTGTGTTGAAACAATTGAAGGAAATGGTGCTGCTGGAACAATAAAGAAGATCACCTTGGTTGAAGGTGGGAAAAGCAGGTATGTATTGCACAAAGTTGAAGAAGTTGATGAGGCCAAATGGGTATACAACTACAGCATAATTGGGGGTGTAGGGTTACCAGAAACATGGGAGAAGATCTCATTTGAGACCATAGTAATGGAAGGTCCAAAAGAGGAAGGAGGATCCATTAGGAAGGTGAACATAAAGTATTTCACCAAAGGAGATGCTGAGGTGTGTGATGAAGTGCTCAAGAGTAACCAAAGCAGGGCTGAAGGCCTTCTCAAGTTCATTGAGGCTTACCTTCTTGCAAATCCTCATTATGTATAA 483 0.4099 MGIFTHEFATPSSVAPARLYKAMALDFHNLFPKIVDSIQCVETIEGNGAAGTIKKITLVEGGKSRYVLHKVEEVDEAKWVYNYSIIGGVGLPETWEKISFETIVMEGPKEEGGSIRKVNIKYFTKGDAEVCDEVLKSNQSRAEGLLKFIEAYLLANPHYV* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1376 160 CDD Bet_v1-like 4 153 - -
Amo14g1376 160 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo14g1376 160 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo14g1376 160 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo14g1376 160 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo14g1376 160 PRINTS Major pollen allergen Bet V1 signature 111 127 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo14g1376 160 PRINTS Major pollen allergen Bet V1 signature 145 155 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo14g1376 160 SUPERFAMILY Bet v1-like 2 159 - -
Amo14g1376 160 PANTHER - 1 159 - -
Amo14g1376 160 Pfam Pathogenesis-related protein Bet v 1 family 4 156 IPR000916 GO:0006952
Amo14g1376 160 Gene3D - 2 160 IPR023393 -
Amo14g1376 160 PANTHER PATHOGENESIS-RELATED PROTEIN 10 1 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1376 Amo-Chr14 22951664 22953078 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1376 - - adu:107483504 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1376 14 22951664 22953078 Amo14g1376 14 22951664 22953078 ECH
Amo14g1376 14 22951664 22953078 Amo04g0267 04 4443462 4444926 hybridization