Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1252 ATGGTGAAGGTGCGGATGAACACTGCTGACGTGGCGGCGGAGGTTAAGTGCCTTCGTCGCTTGATCGGAATGCGTTGCTCCAATGTCTACGACCTCACTCCCAAGACGTATGTCTTCAAGCTGATGAACAGTAGCGGAGTTTCGGAATCCGGCGAAAGCGAAAAGGTCCTCCTTCTCATGGAAAGTGGCGTCAGATTGCACACCACTGTGTACATGCGTGATAAGAGCAATACTCCTTCTGGTTTTACTCTCAAATTGAGGAAGCATATTCGGACTAGGAGGCTTGAAGATGTTAGGCAGCTTGGCTATGATAGGATTATTCTCTTTCAATTTGGATTGGGGGAGAATGCAAACTATGTTATATTGGAACTCTATGCCCAGGGGAACATCCTCCTTACAGATGCTAACTTTACTGTCCTGACTCTCCTGCGATCTCATAGGGATGARGATAAGGGGCTTGCAATCATGTCACGTCATCGTTATCCCATAGAAAGCTGTCGAGTATTTGAGCGAACTACTGCCCAAAAGTTGCAGACAGCGCTAATGACCTCTAAGGAAGATGACAATGATGAGGCTGTTAAGGCCAATGGAAATGAAGCTGATATTGCTAATACAGGAAAAGAAAAGCATGGATTCCGTAAAGGCGGGAAGTCATCTGCCACATTGAAAAGTGTCCTTGGGGAGGCACTTGGTTATGGACCTGCCCTTTCTGAGCATATAATATTAGATGCTGGGRTAATCCCCAATACAAAAGCTCCCAAAGATAAAACATGGGATGATGCTACRGTTCAGGCTTTGGTCCAAGCTGTTGCAAAGTTTGAAGATTGGATGCTGGATGTTATTTCTGGTGAAATAGTTCCTGAAGGATACATTTTGATGCAGAAACAAAATTTGGGAAAGGATTCTTCCTCTCAAACAGGAAGTGTTAGCCAGATTTATGACGAGTTCTGCCCAATCTTACTCAACCAGTTTAAGTCAAGGGATTACACAAAATTTGAGACATTTGATGCTTCCTTGGATGAGTTCTACAGCAAAATTGAGAGCCAAAGGTCTGAACAACAGCAGAAAGCCAAAGAAAACTCAGCTGCTCAGAAGCTGAATAAAATACGCCAGGATCAGGAAAATCGAGTGCACACATTGAGGAAAGAAGCTGATCACTGTGTTAAAATGGCAGAATTGATAGAATACAACTTAGAAGATGTGGATGCTGCTATATTAGCTGTTCGTGTAGCTCTTGCAAAGGGTATGAACTGGGATGACCTTTCACGTATGGTGAAAGATGAAAAGAAAGCTGGAAACCCTGTTGCTAGTCTCATTGACAAGCTCCATCTTGAGAGGAACTGCATGACTTTACTGTTGGCAAACAATCTTGATGAAATGGATGATGATGAGAAGACACTCCCTGTAGATAAGGTTGAAGTTGATTTAGCTCTCTCAGCTCATGCCAATGCTCGGAGGTGGTATGAACTGAAGAAAAAGCAAGAGAGCAAACAGGAAAAGACTATGACTGCGCATGAAAAGGCGTTTAAAGCTGCAGAGAAAAAGACTCGCCTACAGCTTAATCAGGAAAAAAGTGTTGCCACAATTTCACATATGCGAAAAGTTCACTGGTTTGAGAAATTTAATTGGTTCATTAGCAGTGAGAACTATTTGATTATTAGTGGACGTGATGCCCAACAAAATGAGATGATAGTGAAGCGATATATGTCAAAAGGAGATCTCTATGTGCATGCCGATCTCCATGGTGCTTCCAGTACAGTTATCAAGAATCACAAGCCTGATCAACCAGTTCCACCTCTTACACTAAACCAAGCAGGATGTTTTACAGTATGCCATAGCCAGGCATGGGATTCAAAAATTGTTACTAGTGCGTGGTGGGTTTATCCACATCAGGTTAGTAAAACTGCTCCTACAGGGGAATATCTGACAGTTGGAAGTTTCATGATCCGGGGAAAGAAAAATTTTCTTCCACCACACCCTCTTATCATGGGTTTTGGACTGCTATTTCGTTTGGATGAGAGTTCTTTGGGATCACATATAAATGAAAGGAGAGTAAGAGGAGAAGAGGAAGCAGTAGATGATAATGATGAAACTGGTCCAATTGAAGATCAATCTGATTCAGAGTCTGAGAAGGATGTTAGTGATACAAAATCTGCTGCAGACTTAGAAAGCAATGGTAGTTTGAWTGCAGATTCACAGAAGCCCTTACACGAAAGCTTTACTGCAGACACATCTCAGACAGGTTCGGCTACTATCAACGCTGAAACAACAGTTTCAAGTTATTTYCCTCCAAAAGAGACAAGTAAGATGGCTTCGGGTGATGGGGGAAAAGTATCTGATACTAGRGGAAATGGCTTAGCATCTGTTAARCCTCAACTCGAGGAACTTCTTGATCGTGCTCTGGGACTTGGATCTGTTGCTAAATCAAGTAAAAACTATGGAGTTGAGAACCCTAATATTGATTTGGGCAGTGAGCATCATTTGGAAGAGAGCAAACCTTCAGTAAGGGATAAGCCTTATATATCAAAAGCAGAGAGAAGAAAAAGTAAAAAAGAACAGAAACATGGTGTGGCAGATGCAAATGTTGGACATGGAAAGGATGACCCAAAAGCAACTGATAMTTCTGCTAATCTACCTGCAAAAGAAGTTCAAAATTCAAAGGCAGGTYGTCAAAAAATCAGCCGTGGTCAGAAAGGAAAACTTAAGAAGATAAAGGAGAAGTATGCTGATCAAGATGAGGAAGAAAGGAGCATCCGAATGGCGTTATTAGCTTCCTCTGGAAAGTCAAACAAGAAGGAAGAGACATCAAGTGAAAAAGATGCACCAGACAAAGGGATAAAACCTGGAAATGGTCCTTCAGAAGCTCCAAAGATATGTTTCAAGTGTAAGAAGGCAGGTCACTTATCTCGGGATTGTAAGGAGCAACRGGATAGTCATTCYATTGGTGAAACCGAAGAAAATCTTAATAAGKGTGCTAGTAACCCTTCCCAAGCAGATAGGGTGGCAATGGAAGAAGATGATATTAATGAAATAGGAGAAGAAGAGAAAGAAAAACTAAATGATGTGGATTACTTGACTGGGAATCCACTCCCTAATGACATTCTCTTATACGCTGTTCCTGTCTGTGGTCCTTATAATGCAGTTCAGTCCTACAAATATAGAGTGAAGATAATTCCTGGATCCCTGAAGAAAGGAAAAGCTGCAAAAACTGCAATGAACCTGTTCAGCCACATGTCCGAAGCTACGAACCGGGAGAAGGAGTTGATGAAAGCCTGTACGGATCCCGAGTTGGTTGCCGCGTTTATAGGTAATGTGAAGATATCGGCAGCAGGCCTAACTCAGTTGAAGCAGAAGCAAAAGAAAGGCAAGAAGAGCAGCAAGAAGGAAAGTTAG 3393 0.4203 MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLTPKTYVFKLMNSSGVSESGESEKVLLLMESGVRLHTTVYMRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIILFQFGLGENANYVILELYAQGNILLTDANFTVLTLLRSHRDEDKGLAIMSRHRYPIESCRVFERTTAQKLQTALMTSKEDDNDEAVKANGNEADIANTGKEKHGFRKGGKSSATLKSVLGEALGYGPALSEHIILDAGXIPNTKAPKDKTWDDATVQALVQAVAKFEDWMLDVISGEIVPEGYILMQKQNLGKDSSSQTGSVSQIYDEFCPILLNQFKSRDYTKFETFDASLDEFYSKIESQRSEQQQKAKENSAAQKLNKIRQDQENRVHTLRKEADHCVKMAELIEYNLEDVDAAILAVRVALAKGMNWDDLSRMVKDEKKAGNPVASLIDKLHLERNCMTLLLANNLDEMDDDEKTLPVDKVEVDLALSAHANARRWYELKKKQESKQEKTMTAHEKAFKAAEKKTRLQLNQEKSVATISHMRKVHWFEKFNWFISSENYLIISGRDAQQNEMIVKRYMSKGDLYVHADLHGASSTVIKNHKPDQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHINERRVRGEEEAVDDNDETGPIEDQSDSESEKDVSDTKSAADLESNGSLXADSQKPLHESFTADTSQTGSATINAETTVSSYFPPKETSKMASGDGGKVSDTRGNGLASVKPQLEELLDRALGLGSVAKSSKNYGVENPNIDLGSEHHLEESKPSVRDKPYISKAERRKSKKEQKHGVADANVGHGKDDPKATDXSANLPAKEVQNSKAGXQKISRGQKGKLKKIKEKYADQDEEERSIRMALLASSGKSNKKEETSSEKDAPDKGIKPGNGPSEAPKICFKCKKAGHLSRDCKEQXDSHSIGETEENLNKXASNPSQADRVAMEEDDINEIGEEEKEKLNDVDYLTGNPLPNDILLYAVPVCGPYNAVQSYKYRVKIIPGSLKKGKAAKTAMNLFSHMSEATNREKELMKACTDPELVAAFIGNVKISAAGLTQLKQKQKKGKKSSKKES* 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1252 1130 Gene3D - 953 1005 - -
Amo14g1252 1130 MobiDBLite consensus disorder prediction 704 718 - -
Amo14g1252 1130 MobiDBLite consensus disorder prediction 822 871 - -
Amo14g1252 1130 ProSiteProfiles Zinc finger CCHC-type profile. 959 974 IPR001878 GO:0003676|GO:0008270
Amo14g1252 1130 SMART c2hcfinal6 958 974 IPR001878 GO:0003676|GO:0008270
Amo14g1252 1130 Pfam NFACT N-terminal and middle domains 10 161 - -
Amo14g1252 1130 Pfam NFACT N-terminal and middle domains 218 533 - -
Amo14g1252 1130 Pfam Zinc knuckle 958 974 IPR001878 GO:0003676|GO:0008270
Amo14g1252 1130 PANTHER - 3 1118 - -
Amo14g1252 1130 Pfam NFACT protein C-terminal domain 1015 1108 IPR021846 -
Amo14g1252 1130 MobiDBLite consensus disorder prediction 903 919 - -
Amo14g1252 1130 MobiDBLite consensus disorder prediction 188 215 - -
Amo14g1252 1130 MobiDBLite consensus disorder prediction 931 945 - -
Amo14g1252 1130 Coils Coil 356 383 - -
Amo14g1252 1130 MobiDBLite consensus disorder prediction 350 370 - -
Amo14g1252 1130 MobiDBLite consensus disorder prediction 682 957 - -
Amo14g1252 1130 Pfam NFACT protein RNA binding domain 540 651 IPR008532 -
Amo14g1252 1130 Gene3D ibrinogen binding protein from staphylococcus aureus domain 6 163 - -
Amo14g1252 1130 SUPERFAMILY Retrovirus zinc finger-like domains 943 976 IPR036875 GO:0003676|GO:0008270
Amo14g1252 1130 MobiDBLite consensus disorder prediction 719 766 - -
Amo14g1252 1130 MobiDBLite consensus disorder prediction 878 892 - -
Amo14g1252 1130 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 3 1118 - -
Amo14g1252 1130 MobiDBLite consensus disorder prediction 973 992 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1252 Amo-Chr14 20001680 20009563 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1252 K24971 - gmx:100807437 1836.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1252 14 20001680 20009563 Amo14g1252 14 20001680 20009563 ECH