Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5815 ATGAAGCACTTCATGCTGCCAAGAAATGCAATCTTGCGGGAGACACACACTCCTACTCCCGCAGAGTTCCCTTCTCCTTCACCTTCACCTTCCTCAACCGCCAAAAAACCCAGGCCATCTCGCAGGAACAGATCCACCAAGGAGAATGATCCTCCTCCCGAACACCACAATGCCCGATTCAAAAGCCTCTTGCCTCCGAGGCCTCCCTCTTCAAACCCTCTCAAGCGCAAGCTCGCCCTTGATGTCCCTCTTACTGACAACTCAGTCCCCGCCAATTTCGATTCTGGGGTCAAGGTGGTTGTGAGGATGAGACCTCTGCGCCACGACAAGGAGGAAGTGGATTCTTCTGGGGTTAAGAAGATTTCCAATGATTCATTGTTCATCAACGGTCAGAATTTCACATTTGATTCTGTTGCTGACACTAACGCTACTCAGCTAGACATTTTTGAGCTTGTCGGGGCGCCTCTTGTGGAGAATTGCTTGGCAGGATTCAATAGTTCTGTATTCGCATATGGGCAGACGGGAAGTGGAAAGACGTATACAATCTGGGGACCTCCCAATTCTTTGTCAGAAGACAATCTAACAAATGATCAGAGAGGCCTTACGCCACGTGTATTTGAGAGACTTTTTTCCCGCATAGACGAAGAGCAAACTAAGCGTTCTGACCAGCAACTCAAGTATCAGTGCCGCTGTTCTTTTATTGAGATATACAATGAACAAATAACAGATCTATTAGATCCAAATCAAAGAAACCTACAGATCAGAGAAGATGTCAAATCTGGCGTCTATGTTGAAAATCTTACAGAAGAGCCTGTCTGTTCTATGAAGGATGTGACTCAGCTTTTAATTAAGAGCTCTGCAGATGGTATAAGCAGATTTAAAACAAGTAGAATCAACCTTGTTGATTTAGCTGGGTCTGAGCGGCAAAAATTAACGGGTGCTGCTGGAGAGCGATTGAAGGAAGCTGGCAATATTAATAGATCACTTTCACAGCTTGGGAATTTGATAAACATTCTAGCTGAAGTTTCTCAGACAGGAAAGCAGCGACATATACCATATAGAGATTCCAAGTTGACGTTTTTATTGCAGGATTCCCTTGGAGGAAATGCAAAATTAACAATGGTTTGTGCTATTTCCCCAGCACAAAGTTGTAGGAATGAAACTTTCAGTACTCTGAGATTTGCACAACGTGCCAAAGCTATCAAGAATAAAGCAGTTGTTAATGAAGTTATGCATGATGATGTGAACCACTTACGGAAAGTGATACGCCAACTCAGGGATGAGCTGCATCAAATTAAAGCAAATGGTTACAGTCCAAGTGATGGAAGTAGAGGCCATTCAACAGCTTGGATCCAAAGAAGTTTGAATTTATTGCAGTCTAGCCTTAGCCGCCCACAATCACTACGTCATGTTGATGATGATGGTGATGAGGTGATGGAGATTGTTGAGCATGGTGTTGATGACCATTTGGTAACTCTCCACAATACGGATGGAGGTTCTGCTGCCCTGTCAGCCCCCAATGCATCTGTTGATTCTCCTAACCCTGGTGTAGCCCAATGCAATTCACCCCCTAACCTCAAATCCCCAACTCCCAGTGTTTCACCAACAATTACCAGTAGCAGGAAAAGTCTGAAGACTTCGTTAAGGCTGTCTCCTTCTAATAATATTCTTCAAGGTGAAAGTGAGTTAGACACAAAAATTGTTGATCAGAAATTGTGTACGGGCTTTTCTGGCCAGGAAGCTCCAAATTTCCTTACTAAAAATGAAAATTTAGCTGCAAGCATTGGTCTTGATGTTATTGGTAGCCAGCATCATAGTTCAGCTTTGAGGCAGTCATCGTTGGAGCTCTCATTCAAACACAGGGAATCCAAGCTAATATGTCAAGCTAACAAAGTTGACGTGGGAGTGCAGACTTTTCTTGACAATAATGCTAGAGAAGAAGATTCTGTTGTGTTTGACTGCAATAACTGTAAAAGCATGGTGCAGAATGATGTCACTGAGATAGATGAAGGTTCAAACATGCAGCTGGTGCCTGTTGGTTGCCCTGAGTCAGCAGATAAGCCGAAGAAGAAGAAAATTCTAAAAGCAATAGAGAAGGTTTTGGCTGGATCTATAAGGAGAGAAATGGCGCTGGAAGAGTTTTGTGCGAAGCAGACTTCTGAGATAATGCAGCTCAATCATTTATTGCAACAATACAAGCATGAGAGGGAATGCAACGCCATAATTGCACAGACAAAGGAAGAAAAAATTCTTCGCCTTGAGAGTCTTATTGATGGTGTTTTACCCGCTGAGGAGTTTTTGGATGAAGAGCTGATTTCCCTCAGGCATGAACACAAGCTTTTAAAGGAGAATTATGAACATCATCCAGAAGTTTTGGAGATGAAGATAGAATTAAAAAGAGTACAAGATGAGCTAGAAGAGTACCAGAATTTCTACAAATTGGGGGAGAAGGAAGTGTTGATGGAGGAGATACAAAGTCTAAGAAACCAGCTTCAATTTTATGTAGACTCCTCAGCCACATCAGCAAGAAAGCAATATCTGCCATTGCAATTGACTCATTCATCTGAACCCAGTTTGGCAGCAAATCTCACTGCCATTCCAGATTCAACAGAGGGTGGTGACTGGGAAAGTGAAAATCCAGTATTTACTAAGGACAGTGCCAAAGAAAAACTTGAACATGAAAGAAGTCAATGGGCCGATGCCGAGAGAAAGTGGATTTCACTTACCAAAGAACTGAGTGCTGAGCTTGAAGCTAACAGGTCACTGGCTGTAAAGAGGAAGCAGGAACTAGATGCTGAGAGGAAGTGTGTTAGGGAACTGAATCAAGCAATGCAAACAGCTATAGAAGGCCATGCACGACTTCTAGAGCAATATGCAGATCTGGAAGAGCAACATGTAGAATTGCTTGAAAGGCATAGAAAGATCCAGGATGGAATAGACGATGTCAAGAAAGCAGCTTCCAGAGCAGGGGTAAGAGGTCCAGAGTCTAAGTTCATAAATGCCCTAGCTGCTGAAATTACAGCATTAAAAGCTGAAAAAGAAAAGGAAATAAAAATCTTAAGGGATGAAAATAGAGGCCTTCGAGCCCAATTGAAGGATACCAGTGAAGCAGTTCAAGCTGCAAGTGAACTGCTTGTGCAGCTTAAAGAAGCAGAGGAAGGTGTCATTACTGCACAGAAGCGAGCTATGGATGCTGAGCAGGAAGCTGCAAAGGCCTACAAACAAGTTGATAAATTGAAGAATAAACATGAGAAGGAGATAACCACACTCCAAGAACTGCTTGCCGAAGCACGTTTGCCTAAGAAAGAAAGAGAACCAACTGGTAATCATGGTGTAATTCAACAATTTGAGCCATTCTGTAATGAAGAGGACAGCGACCTTGCAAAACTAGCAGAACAATCTTGTCAAGAGAACAAACACTGGCTGTCAGAATCCTGTCGGGAGAACGTTGACTTTTCTTTCGTGAAGGCTGCAATTGCAAATTCTCCAGAGGAAATGCTACCAACTACCTCTACCGAGCAGGGCTTCTCAATTGAAGAGGCAACGGTGCGTGATCTCCAACTTGCTTTCCAAAGAAACCAGTTAAGTTCTAAGGAACTCGTGGAGTTCTACTTAGAGCGAATCCAAACACTTAACACAGACCTCAAAGCTGTGCTGGAGGTGAATCCAGATGCAGTAGCCCAGGCTAACATAGCTGACCAAGAGAGAAAGGATAAGCCACATGGGTCTTTCTCTGCTTTGCATGGAATACCCATTTTATTGAAGGATAACATTGCAACTAAGGATAAGTTGAACACCACTGCAGGGTCTTATGCATTGTTGGGGTCTGTGGTGCCTAGAGATGCTGGTGTAGTCACCAGGTTAAGGAAAGCTGGGGCTATCATATTAGGAAAAGCCACCCTTAGCGAGTGGTCAAATTTCAGGTCCAATAATGCACCCAGTGGTTGGTGTGCCAGAGGTGGACAAGGAAAGAATCCATACAGCAAGGGTGATCCCTGTGGGTCTAGTAGCGGATCAGCAATATCAGTAGCGGCGAATATGGTGACAGTGTCCCTTGGCACTGAGACTAATGGCTCCATTTTATGCCCTTCAGGTTATAACTCAGTGGTGGGGATCAAGCCAACAGTTGGTCTCACTAGTAGAGCTGGGGTTATCCCAATCAGCCCCAGACAAGACACAGTTGGAGGCTTTGTATCTCTGTTCATGTCCCTCTGTCCCAAGTTTCTGGATGCAAATTGTTTACGGCCTAATAGATTTTGTTTGTTTCTGTCTTTGTCGTCTTCTCCAAATAGGACTGTATCGGATGCTGCCTGTGTTCTTGAAACCATTGTAGGCATTGACACTAACGATGAGGCAACAATTGAAGCATCAAAGTATGTCCCAGAAGGTGGCTATTCTCAATTTCTGAGGGAAGATGGACTAAGCGGGAAGAGACTAGGAGTAGTGAGATCATATTACAATTTTGGAAATGGTACTTTTATGCACAAAACTTTTCAGCTACACCTAGAAACCTTAAGGCAAAGAGGTGCCCTTTTGGTTGACAATTTGAAGATAGATAACATCGTCGAAATCAATATGGATCAAAGTGAAGATATTGCTCTGGAGATTGAATTCAAACTAGCCTTGAATGCATACCTCAATGACTTAGTTGCTTCCCCGGTGAGAAGCTTGGCCGATGTGATAGAATACAACAAGAATCACTCAGAACAGGAGAATCTTGATGAATTTAGCAAAATACTTGCTATTGGAGGTTATCCAGGAATAATTGTTCCAGCAGGATATGAAGAGGGTGTGCCATTTGGAATATGCTTTGGAGGGCTGAAAGGATCAGAGCCAAAGCTTATTGAAATTGCTTATTCCTTTGAGCAACCAACTAAGATTAGGAAGCCTCCTCCAATTCATAAGTAA 4908 0.4322 MKHFMLPRNAILRETHTPTPAEFPSPSPSPSSTAKKPRPSRRNRSTKENDPPPEHHNARFKSLLPPRPPSSNPLKRKLALDVPLTDNSVPANFDSGVKVVVRMRPLRHDKEEVDSSGVKKISNDSLFINGQNFTFDSVADTNATQLDIFELVGAPLVENCLAGFNSSVFAYGQTGSGKTYTIWGPPNSLSEDNLTNDQRGLTPRVFERLFSRIDEEQTKRSDQQLKYQCRCSFIEIYNEQITDLLDPNQRNLQIREDVKSGVYVENLTEEPVCSMKDVTQLLIKSSADGISRFKTSRINLVDLAGSERQKLTGAAGERLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSKLTFLLQDSLGGNAKLTMVCAISPAQSCRNETFSTLRFAQRAKAIKNKAVVNEVMHDDVNHLRKVIRQLRDELHQIKANGYSPSDGSRGHSTAWIQRSLNLLQSSLSRPQSLRHVDDDGDEVMEIVEHGVDDHLVTLHNTDGGSAALSAPNASVDSPNPGVAQCNSPPNLKSPTPSVSPTITSSRKSLKTSLRLSPSNNILQGESELDTKIVDQKLCTGFSGQEAPNFLTKNENLAASIGLDVIGSQHHSSALRQSSLELSFKHRESKLICQANKVDVGVQTFLDNNAREEDSVVFDCNNCKSMVQNDVTEIDEGSNMQLVPVGCPESADKPKKKKILKAIEKVLAGSIRREMALEEFCAKQTSEIMQLNHLLQQYKHERECNAIIAQTKEEKILRLESLIDGVLPAEEFLDEELISLRHEHKLLKENYEHHPEVLEMKIELKRVQDELEEYQNFYKLGEKEVLMEEIQSLRNQLQFYVDSSATSARKQYLPLQLTHSSEPSLAANLTAIPDSTEGGDWESENPVFTKDSAKEKLEHERSQWADAERKWISLTKELSAELEANRSLAVKRKQELDAERKCVRELNQAMQTAIEGHARLLEQYADLEEQHVELLERHRKIQDGIDDVKKAASRAGVRGPESKFINALAAEITALKAEKEKEIKILRDENRGLRAQLKDTSEAVQAASELLVQLKEAEEGVITAQKRAMDAEQEAAKAYKQVDKLKNKHEKEITTLQELLAEARLPKKEREPTGNHGVIQQFEPFCNEEDSDLAKLAEQSCQENKHWLSESCRENVDFSFVKAAIANSPEEMLPTTSTEQGFSIEEATVRDLQLAFQRNQLSSKELVEFYLERIQTLNTDLKAVLEVNPDAVAQANIADQERKDKPHGSFSALHGIPILLKDNIATKDKLNTTAGSYALLGSVVPRDAGVVTRLRKAGAIILGKATLSEWSNFRSNNAPSGWCARGGQGKNPYSKGDPCGSSSGSAISVAANMVTVSLGTETNGSILCPSGYNSVVGIKPTVGLTSRAGVIPISPRQDTVGGFVSLFMSLCPKFLDANCLRPNRFCLFLSLSSSPNRTVSDAACVLETIVGIDTNDEATIEASKYVPEGGYSQFLREDGLSGKRLGVVRSYYNFGNGTFMHKTFQLHLETLRQRGALLVDNLKIDNIVEINMDQSEDIALEIEFKLALNAYLNDLVASPVRSLADVIEYNKNHSEQENLDEFSKILAIGGYPGIIVPAGYEEGVPFGICFGGLKGSEPKLIEIAYSFEQPTKIRKPPPIHK* 1636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5815 1635 Coils Coil 791 837 - -
Amo13g5815 1635 ProSiteProfiles Kinesin motor domain profile. 96 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g5815 1635 Coils Coil 415 435 - -
Amo13g5815 1635 MobiDBLite consensus disorder prediction 43 61 - -
Amo13g5815 1635 SMART kinesin_4 94 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g5815 1635 PRINTS Kinesin heavy chain signature 297 315 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g5815 1635 PRINTS Kinesin heavy chain signature 163 184 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g5815 1635 PRINTS Kinesin heavy chain signature 351 372 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g5815 1635 MobiDBLite consensus disorder prediction 1 75 - -
Amo13g5815 1635 Gene3D Kinesin motor domain 90 286 IPR036961 -
Amo13g5815 1635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 433 IPR027417 -
Amo13g5815 1635 Gene3D Kinesin motor domain 287 438 IPR036961 -
Amo13g5815 1635 Pfam Amidase 1199 1396 IPR023631 -
Amo13g5815 1635 PANTHER PHRAGMOPLAST-ASSOCIATED KINESIN-RELATED PROTEIN 70 285 - -
Amo13g5815 1635 PANTHER PHRAGMOPLAST-ASSOCIATED KINESIN-RELATED PROTEIN 290 1124 - -
Amo13g5815 1635 Coils Coil 715 735 - -
Amo13g5815 1635 Coils Coil 884 904 - -
Amo13g5815 1635 MobiDBLite consensus disorder prediction 502 544 - -
Amo13g5815 1635 ProSitePatterns Kinesin motor domain signature. 296 307 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo13g5815 1635 SUPERFAMILY Amidase signature (AS) enzymes 1177 1633 IPR036928 -
Amo13g5815 1635 Gene3D Amidase signature (AS) domain 1576 1633 IPR036928 -
Amo13g5815 1635 Gene3D Amidase signature (AS) domain 1143 1399 IPR036928 -
Amo13g5815 1635 Gene3D Amidase signature (AS) domain 1430 1575 IPR036928 -
Amo13g5815 1635 Pfam Kinesin motor domain 116 286 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g5815 1635 Pfam Kinesin motor domain 292 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo13g5815 1635 Coils Coil 913 933 - -
Amo13g5815 1635 Coils Coil 1003 1096 - -
Amo13g5815 1635 PANTHER KINESIN-RELATED 70 285 IPR027640 GO:0003777|GO:0007018
Amo13g5815 1635 PANTHER KINESIN-RELATED 290 1124 IPR027640 GO:0003777|GO:0007018
Amo13g5815 1635 Coils Coil 944 971 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5815 Amo-Chr13 160436244 160444709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5815 86 433 Miscellaneous Gene Families AT4G39050 35.156 6.76e-52 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5815 K10400 - gmx:100790067 1447.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5815 13 160436244 160444709 Amo13g5815 13 160436244 160444709 ECH