Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5639 ATGTGGGAGAAGGGACTCATTCACTCAAGGTTTATATTTTGCTTGATGCTCGTCTCCATGTTCCTTTTGGTCGTATCTTTTCTTTTCCTATTCCAGTTCAGCAGCCATTCTTTGATACCTAGATCGGTGTTAGAGCTTATTCTGGTCAATAACACATCACTTTACTTCATGCCCAATTTCAAGAGGGAAAAACTTGTACTCCCTCATGACCCTTCCGGAGACTTGAAGCTTCAGTTGCAAAAACATGGAGAATCCGATTGTCGAGTTCCAAATTCAAGCCAGAAAACAAGTTCTTTAGGACAGCAGATGAGTGTGACATCTGACCCATTGAGAGTATTCATGTATGATTTGCCTCCAGAATTTCACTTTGGGTTATTAGGTTGGAAGGGAAGTGTAAATCAAACGTGGCCAGTGATTGACGACCTCAAATGTATCCCCCACTATCCTGGTGGATTGAATCTACAGCACAGTATAGAATATTGGCTCACACTTGATCTTCTGTCATCAAACAATGCAAAACCTGACCAACCTCACACCGCAATTAGAGTGCATGATTCAAGTCAGGCAGATGTAATTTTTGTGCCATTTTTCTCATCTTTGAGTTACAATCGGCATTCCAAGCTCCGTGAAGGTGAAAAAGTTAGTGTTAACATGATGTTGCAAGACAAGTTGGTAAGGTTTCTGATGGGCCGGAAAGAATGGAAGCGCTCGGGGGGGAAGGATCATCTAATTGTAGCCCACCATCCTAACAGCCTGCTAGACGCAAGGAAAAAATTGGGATCTGCTATGCTTGTGCTTGCCGATTTTGGAAGGTACCCTGTTGAATTAGCAAATGTGAAGAAAGATATAATAGCTCCCTATAGGCATCTAGTAAGCACCGTACCAAGAGCTAAATCAGCTTCATACAATGAACGCCCCACGCTGGTGTATTTTCAGGGTGCAATATACAGGAAAGATGGAGGAGCTATTCGCCAAGAGCTGTATTACCTTCTAAAAGATGAGAAAGATGTGCATTTTGCATTTGGGAGCATAGGAGGAAATGGAATCAATCAGGCAAGCCATGGAATGTCCCAATCAAAATTCTGCCTGAACATTGCTGGGGATACCCCGTCCTCCAATCGCCTCTTTGATGCAATAGTAAGCCACTGTGTTCCTGTGATCATTAGCGATGAAATCGAGCTACCCTTTGAAGATGTCTTGAACTACTCATATTTTTCCATTTTTGTCCGTGCCTCTGATGCTATAAAGAAAGGTTTCCTGCTGAATCTCCTCCATTCAATCAAGCGCGAGGAGTGGACCAAGATGTGGAAAATATTGAAGGATATCACGCATCACTTTGAGTATCAATATCCATCCCAGCCTGGGGATGCAGTAAATATGATTTGGCAGGATGTTGCACGTAAGATTTCTTCAGTGAAGTTCGATTTGCACAGGAAGAACAGATACCGGAGATCTCAACTTCCAGTTAAGACCGACTGA 1479 0.4287 MWEKGLIHSRFIFCLMLVSMFLLVVSFLFLFQFSSHSLIPRSVLELILVNNTSLYFMPNFKREKLVLPHDPSGDLKLQLQKHGESDCRVPNSSQKTSSLGQQMSVTSDPLRVFMYDLPPEFHFGLLGWKGSVNQTWPVIDDLKCIPHYPGGLNLQHSIEYWLTLDLLSSNNAKPDQPHTAIRVHDSSQADVIFVPFFSSLSYNRHSKLREGEKVSVNMMLQDKLVRFLMGRKEWKRSGGKDHLIVAHHPNSLLDARKKLGSAMLVLADFGRYPVELANVKKDIIAPYRHLVSTVPRAKSASYNERPTLVYFQGAIYRKDGGAIRQELYYLLKDEKDVHFAFGSIGGNGINQASHGMSQSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLNYSYFSIFVRASDAIKKGFLLNLLHSIKREEWTKMWKILKDITHHFEYQYPSQPGDAVNMIWQDVARKISSVKFDLHRKNRYRRSQLPVKTD* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5639 492 Pfam Exostosin family 108 422 IPR040911 -
Amo13g5639 492 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 4 481 IPR004263 GO:0006486|GO:0016757
Amo13g5639 492 PANTHER EXOSTOSIN FAMILY-LIKE PROTEIN 4 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5639 Amo-Chr13 158256763 158259755 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5639 - - gmx:100795371 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5639 13 158256763 158259755 Amo13g5639 13 158256763 158259755 ECH