Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5552 ATGGCGTTGAATTTCTCGCATCGACCAATTTTTCCGGGTGGTCTGTCTGAGGATAATTTGGTTGCGCCCATGAGGATTGGGAATGGGTACCGGGTGGAAGGTATTCAGGAGAAGGGTAAGGGTGCAGGTGGTGGTGATGGTTTTGGGAATGCATCATGGCATGATGCTGATAATTGCTTTGATTATGGGAGAGAGAGGTGTGATATGGGTAACGCTCAAGATTCTGTCTCCAAGGACATTCTTGATCTTTTGCCCTCGGATCCCTTTGGAATGGACATCAGCACCACATTTACTGCTATCAAGGGGTGGCTTCAGGATTTGGAGGTTGATAATGGTGGTTACCGGATGGAGGAGCTTCGGGAAGGCAACCGTTTCCAGATGTATGCTGAGTTGGAATTTCTTTGCAACAATGCTATGTGGTTTCACACGTTAGAGCCGAGTGGATTCGGTGAGTGCTCTTTGAGAGTTGGAGCTCCATCCTGCAATTTTGCTTCTGGATCTGATTGTAGTATGGATGACAAGTTGGGTTTTGGATCTGATTACGAAGATGTGGGCATTCCTAGCTGGTCTGGTGGTGACACACACATGGATGATGGGAACTTTTTTGGTGCCGATGAACTTTCTCCTCATCCAGCTATGAGTTTTTGTCTTGGCTATCTAGGATTGTCTGATCTTCTTGTTGTTGAAAGAGTATGCAAATCTCTGCGTTCTACAGTTCGAGGCGATCCACTTTTGTGGAGAAGGATACACATAGACCAACCTTTAAATGAGAGGATTACTGATGATGTTCTTATGCAACTATCTGATAGAGCTCAGGGTAATCTTCAGTGCTTGAGCCTAGTGGAGTGCACTAGGATTACTGATGATGGTCTGAGGCGTGTTCTTGAAGCCAATCCCAAGTTAACTAAGTTGAGTGTTCCTGGATGCACAAGACTCAGTATTGAAGGTATAGTGAGTACTTTAAAAGCTTTCAAGGCTATGGGAACACAAGGGGTGAAACATTTACACATAGGTGGCCTTTATGGTGTTACACAAAACCATTTTGAAGAACTGAAGCTCTTGATGGGCACTGATAGCCAGGTGCTGCAGCATCCACGCAAACCTCACTTTTACCGCAGGGGCAACTTATACCTGTCTTGTGATGATGACCGAGACATAGATATTGAAGTTTGTCCAAGATGCCAGAATTTAAGGCTGGTATATGATTGTCCTGCAGAGGGCTGTCAAGCAGTGGGGCATGCCCCAGAGTGTAGGGCATGCACTTTATGCATAGCCCGGTGTAGTCAGTGTGGCCATTGCATCAATGACAGCGAGTATGAAGAAACATTTTGTCTGGAACTACTTTGCTCCTCTTGTTCCAAGCTGCTAATCAAATGTTCAGAAAGGCCAGATAGAAGTGTTGGCCCAACTGAGTCAGTTGTTCCCCATGAGCACAGTTAG 1440 0.4569 MALNFSHRPIFPGGLSEDNLVAPMRIGNGYRVEGIQEKGKGAGGGDGFGNASWHDADNCFDYGRERCDMGNAQDSVSKDILDLLPSDPFGMDISTTFTAIKGWLQDLEVDNGGYRMEELREGNRFQMYAELEFLCNNAMWFHTLEPSGFGECSLRVGAPSCNFASGSDCSMDDKLGFGSDYEDVGIPSWSGGDTHMDDGNFFGADELSPHPAMSFCLGYLGLSDLLVVERVCKSLRSTVRGDPLLWRRIHIDQPLNERITDDVLMQLSDRAQGNLQCLSLVECTRITDDGLRRVLEANPKLTKLSVPGCTRLSIEGIVSTLKAFKAMGTQGVKHLHIGGLYGVTQNHFEELKLLMGTDSQVLQHPRKPHFYRRGNLYLSCDDDRDIDIEVCPRCQNLRLVYDCPAEGCQAVGHAPECRACTLCIARCSQCGHCINDSEYEETFCLELLCSSCSKLLIKCSERPDRSVGPTESVVPHEHS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5552 479 SUPERFAMILY F-box domain 209 252 IPR036047 GO:0005515
Amo13g5552 479 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 1 464 - -
Amo13g5552 479 PANTHER F-BOX PROTEIN SKIP14 1 464 - -
Amo13g5552 479 Gene3D Ribonuclease Inhibitor 222 363 IPR032675 -
Amo13g5552 479 SUPERFAMILY RNI-like 257 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5552 Amo-Chr13 157060905 157064290 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5552 - - aip:107632017 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5552 13 157060905 157064290 Amo13g5552 13 157060905 157064290 ECH