Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5546 TTTGAACAAGATTTTGTTTGCAAATTAGAAATGACTAACGATTCAAGAAAGTCTGCCATTGATAATTGGCTTCCTGTCACTGCTTCCAGAAATGGCAAATGGTGGTACTCTGCTTTTCACAACCTCACCGCCATGGTTGGTGCTGGTGTCCTCAGCCTTCCTTATGCCATGTCAAAGATGGGCTGGGGTCCTGGCGTGGTTGCACTGCTATTGTCATGGATCATCACCTTGTTCACACTATGGCAAATGGTTGAGATGCACGAAATGGTTCCCGGCAAGAGATTTGACCGGTACCACGAGTTAGGGCAGTATGCCTTTGGTGAAAAGCTTGGCCTATACATCGTGGTTCCCCAACAGCTACTTGTTGAGGTTGGCACATGCATTGTTTATATGGTCACCGGAGGCAAATCTCTTAAGAAGTTTCATGGCAGCGTTTGTCCCACATGCAAAGACATCAGAACCTCCTATTGGATTATGATCTTTGCATCTGTCAACTTTGTACTCTGTCAATGCCCCAGCTTCAACTCTATTTCTGCTGTCTCTCTAGCTGCAGCCATCATGTCTATTGCCTACTCAACTATTGCTTGGGTGGCTTCACTTATGAAGGGAGTTCAACCAAATGTGGATTATGGCTACAACGCAAAGAGCACAGCAGATGGTGTGTTCAACTTCATGACTGCCTTGGGAGATGTAGCATTCGCCTATGCAGGCCACAATGTAGTTCTGGAAATCCAAGCAACGATGCCTTCAACCGAAGAAGTGCCTTCCAAGAAACCAATGTGGAACGGAGTTATCCTTGCATACATAGGAGTGGCAATCTGCTACTTCCCTGTTGCCTTCATTGGATACTATGTATTTGGAAACTCGGTTGAAGATAACATCCTCATCACTCTTGAGCACCCTATTTGGCTCATTGCTGCTGCTAACATGTTTGTTATTGTCCATGTTGTTGGTGGCTACCAGGTATTTTCTATGCCAGTGTTTGATATGATGGAAACCTTATTAGTGAAGCAGTTTAAGTTCCCCCCTTGCTTCACACTTCGATTCGTTGCCCGCACTCTATTTGTAGCATTCACAATGGCAATTGCTATATGCGTCCCATTCTTTGGTTCACTTCTTGGATTTCTTGGAGGATTTGCCTTTGCCCCAACATCATACTTCCTGCCTTGCATAATATGGCTTAAAGTTTACAAACCTAAGAGATTTAGCTTGTCTTGGTTCGTAAATTGGACATGCATTGTGATTGGGGTACTTTTGATGACAGTATCCCCAATTGGAGCACTGAGAAACATCATCATTTCAATCCATAACTACAAGTTCTTCTCCTGA 1329 0.4409 FEQDFVCKLEMTNDSRKSAIDNWLPVTASRNGKWWYSAFHNLTAMVGAGVLSLPYAMSKMGWGPGVVALLLSWIITLFTLWQMVEMHEMVPGKRFDRYHELGQYAFGEKLGLYIVVPQQLLVEVGTCIVYMVTGGKSLKKFHGSVCPTCKDIRTSYWIMIFASVNFVLCQCPSFNSISAVSLAAAIMSIAYSTIAWVASLMKGVQPNVDYGYNAKSTADGVFNFMTALGDVAFAYAGHNVVLEIQATMPSTEEVPSKKPMWNGVILAYIGVAICYFPVAFIGYYVFGNSVEDNILITLEHPIWLIAAANMFVIVHVVGGYQVFSMPVFDMMETLLVKQFKFPPCFTLRFVARTLFVAFTMAIAICVPFFGSLLGFLGGFAFAPTSYFLPCIIWLKVYKPKRFSLSWFVNWTCIVIGVLLMTVSPIGALRNIIISIHNYKFFS* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5546 442 Pfam Transmembrane amino acid transporter protein 31 427 IPR013057 -
Amo13g5546 442 PANTHER OS05G0424000 PROTEIN-RELATED 13 437 - -
Amo13g5546 442 Gene3D Amino acid/polyamine transporter I 28 439 - -
Amo13g5546 442 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 13 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5546 Amo-Chr13 156975262 156979166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5546 15 442 Organic Solute Cotransporters AT1G24400 72.664 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5546 - - gmx:100786115 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5546 13 156975262 156979166 Amo13g5546 13 156975262 156979166 ECH