Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5542 ATGAGATACTTGGAAGATAAAGGGTGCTACAACAACCATGGACCAACGGCACAAGATACCCCAAATAGCAGTGCAATGTACTCAGATTTTCACAAAGGAAACAATGCTGCCGCCGCGGCTTGCGGTTCTTCCCATCAACAACACAGAACAACCATGGGGAAACCAACACCTTCTAAGTGGGATGATGCACAAAAATGGCTTGTAGGATTGTCGAAAGGCGGAGGCGAGAAGAGCCACCAATCGAAATCAAGCAAGCCAAGAGACTCAAATGCAGATGACCTTAGATTGATAGCACCGGTTCCACAGAAGGAGAATGGTTATTCAAGCGCTAGTGAGAAAGAGGATGAAGATCAAGAACATGATGGAAGAGAAACCATGAAGATAGAGTGTTGTGATGAGTCACTTTGGAGAACCAACTACAACAATAACAATAAGGGTTCTTCAACCAACAGTAACAGCATAGCAGTGCAGTCAATATGCTTTAGAGATATGGGGACTGAGATGACACCAATTGCTAGCCAAGAGCCTTCAAGAACCGCTACGCCGATTCGAGCCACTACTCCGGCAACTAGGAGTCCAATTCACTCTGGGGCTTCAACTCCGGTGAGGCCCCAAAATGGTGGGATGGAATCTCATTCTGGTGAGGGTCATCAAGGATCATCAAACCCTTCTTGCAAGGTGTCTGAGAAGAAGGCTGAAGATCATGCAAGGAAGTTGAGCCCTCTTGAAAGCCGAGCATTGGCTTGGGATGAAGCAGAAAGTGCTAAGTATATGGCCAGGTTCAAGCGTGAAGAGGTGAGGATTCAAGCATGGGAAAACCATCAGATAAGGAAAGCTGAAATGGAAATGAAGAAAACGGAGGTGAAAGCCGAGAGAATGAAAGCTCTGGCACAAGAAAAGTTAGCAAATAAACTTGCTGCAACAAGAAGAATAGCTGAAGAGAAGAGAGCTAATGCACAAGTGAAGCTGAATGAGAAAGCATTGAGAACTACAGAACGAGCAGATTATATAAGAAGAACAGGACAAGTTCCATCTGCGTTCTCTTTCAGTTTCAACTGCAAGTTCCCTTCCCTTTGTTGCTGCTGGTAG 1089 0.4536 MRYLEDKGCYNNHGPTAQDTPNSSAMYSDFHKGNNAAAAACGSSHQQHRTTMGKPTPSKWDDAQKWLVGLSKGGGEKSHQSKSSKPRDSNADDLRLIAPVPQKENGYSSASEKEDEDQEHDGRETMKIECCDESLWRTNYNNNNKGSSTNSNSIAVQSICFRDMGTEMTPIASQEPSRTATPIRATTPATRSPIHSGASTPVRPQNGGMESHSGEGHQGSSNPSCKVSEKKAEDHARKLSPLESRALAWDEAESAKYMARFKREEVRIQAWENHQIRKAEMEMKKTEVKAERMKALAQEKLANKLAATRRIAEEKRANAQVKLNEKALRTTERADYIRRTGQVPSAFSFSFNCKFPSLCCCW* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5542 362 Coils Coil 276 296 - -
Amo13g5542 362 MobiDBLite consensus disorder prediction 1 126 - -
Amo13g5542 362 MobiDBLite consensus disorder prediction 172 226 - -
Amo13g5542 362 Pfam Remorin, C-terminal region 243 345 IPR005516 -
Amo13g5542 362 MobiDBLite consensus disorder prediction 39 54 - -
Amo13g5542 362 MobiDBLite consensus disorder prediction 172 239 - -
Amo13g5542 362 PANTHER OS02G0116800 PROTEIN 1 350 - -
Amo13g5542 362 MobiDBLite consensus disorder prediction 108 126 - -
Amo13g5542 362 Coils Coil 302 322 - -
Amo13g5542 362 MobiDBLite consensus disorder prediction 13 30 - -
Amo13g5542 362 MobiDBLite consensus disorder prediction 78 92 - -
Amo13g5542 362 PANTHER F12A21.28 1 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5542 Amo-Chr13 156927784 156930848 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5542 - - gmx:100813335 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5542 13 156927784 156930848 Amo13g5542 13 156927784 156930848 ECH