Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5534 ATGACCGGAAGCGGAAGAAGAACCACTCGGAGCAGAGCCAGATCCTCCGCCGATCCTGACGGCGGAGACGACGATGCCTCACTCCGGGAAGCGAAGTTGAAGCTGAAGCGTCGGAGAGAGAGGAGCAAGTACGGAAGTGCGATTCCGCTATTCAACAATCCGAACCTGAAGGTGGTGCTCCTTATCACCGTGGTGGCATTCTTCGTAATCTTGTTTCTGATCTTTCACCTTGTCAATTCCACCGCCGAACCCGAGCTCCCTCGCGCCGTCACGCCGCTTCCTGCCCCCAAGATTATGGACCTTCCTCAGTTTCAAGGTGAACACAGGGAGAGTTTGTATTGGGGAACTTATCGTCCCCATCTTTATCTTGGAATTCGTGCCAGGACTTCACAGTCTTTGATGGCTGGATTGATGTGGATTGGTGTGAAGGATGGAAGGTATCACTTGCGACATGTCTGCAAAGATGAGGATGATCTTGGCACTTATGGTTGGACAAAGCATGATGGACGTGAATTCGGGCATCAGTTGCTGGCAGATCATGGCATGACTTTGGCTACTGAGTTTTTAAAATCAAAGGTGGGTGGCAGTGGTTACGGAGGGGATTGGGCAGTTCGAATTAGTGTGCACATCAATAAGTCTGAGTGGAACGAGGAGTTTGGGAAAGGTGCCCAGCTTTTCTTCTATTTGGCTGATGAAGGTGGTAATGTTCTGGATCTAAGTAGAGAAAAGTTGAACATTCATGAGGATTCTTTGCTTGCATCTGGCTCTCGACTGGATATTGGAAATTGGCAGCTGCATTTAAAATCAACGGATGATTTAGAGCTGCATTATTCTGGATTTCGCACCCCTCACTTTCATAATTTATCTGATCTTGTTGAGGAAAATCTTGCATCACAAATAAGAAACCATGCTCGATTACAGCTGTCTGACTCATCAGTTGATTCTCCAAATGTGTTAGTTTTTCAGATTATCGGTGGATTTCCTTTCACAACAGATATTGCACTTCTTTCTGGAACTGGTTCGGAAAGCTCAAGAGTAGACGAGCGTGTTAGTCAGTTAACAGGCACCTCATTGACCAGTCAACTGAATGATAAGAAACAAGCTTTTGACAAAAAGTTTGAAGATGTTTTCAGTTTGGCTGAGAAGGTGGATTCAGAATCCATATCTGTTGGTAAGGCTGCTGTAGGGAACTTGTTAGGTGGCATTGGTTACTTTTATGGGCAGTCAGTAATTGCAATTCCAAGAACCCTCGATCTTAAAGAGCATGTTAAGTATGTATCATATTGGCCTGCTGAGCTTTATACAGCTGTACCAGGTCGATCTTCCTTTCCAAGAGGATTTTTATGGGATGAAGGCTTTCATCAACTTCTAATCTGGCGTTGGGATATTCATATTTCGTTGGATATCATTGGACACTGGTTAGATTTGATGAATGTTGATGGATGGATACCTCGTGAACAAATTCTGGGAGCCGAAGCGCGAAGTCGGGTCCCAGAGGAATTTGTTCCGCAGCATCCAACAAATGGAAATCCTCCAACTCTGTTTTTAGCATTGAATGATATAGTTAACGGCTTGAAGACCAACAAGTTTAATTCAAAGGATAGAAGTGATATATCTCTGTTCCTAGAGCGTGCCTTTGTTAGATTGGAAGCATGGTTCCAATGGTTTAATACAACTCAGTCAGGGAATCAGATGGGCAGCTACTACTGGCATGGACGGGACAATAAAACAATACGAGAATTGAATCCCAAGACACTGTCCTCAGGATTGGATGATTATCCACGTGCTTCCCACCCAAGTGAAGATGAGCGCCACTTGGATCTTAGGTGTTGGATGTCACTTGCAGCAGATTGCATGCATTCCATTGAAGAGCTGTTAGATAAGGAAACCAAACCTAGTAAGAATTATGGTTCTACAGCTAAGTTGCTATCAGATCTTGAGTTAATAAACCAGATGCATTTTGATGTTGCATATGGTGCGTACTTTGATTTTGGAAATCATACAGAGAAGGTTCAACTTAAATGGAAAGAGGTGGCGGTTGGACATAATCAAGCTGCTCGCGAGCTTGTCCGGGAAGTTTTGGAGAGACCCAAGTTGAGATTTGTTCCCCACATTGGTTATGTGAGTTTATTCCCGCTCATGACAAGGATCATTCCATCAGGATCATGGATTCTGGAAAAGCAGCTTGAACTCATTTCAAATCGAAGCCTCTTGTGGACTGACTATGGACTACGTTCTCTTGCCAAAACAAGTTCCATGTACATGAAACGCAACACAGAGCATGATGCTCCATATTGGAGAGGTACAATTTGGATAAACATGAATTACAGAATTCTTTCAGCACTCCACCATTACTCGAAAGAGAATGGCCCGTATCAGGACAGAGCTAAAGCTATCTACGAAGAATTGAGAAGCAATTTAATTAGAAATATAGTACGCAATTATCGACAGAGTGGATATCTGTGGGAACAGTATGATCAGGTTAAGGGTAAGGGAAAAGGGGTACACCCATTTACGGGTTGGACATCACTTGTGACATTAATCATGGCAGAGGCTTATGAAAAGATTTAG 2571 0.4372 MTGSGRRTTRSRARSSADPDGGDDDASLREAKLKLKRRRERSKYGSAIPLFNNPNLKVVLLITVVAFFVILFLIFHLVNSTAEPELPRAVTPLPAPKIMDLPQFQGEHRESLYWGTYRPHLYLGIRARTSQSLMAGLMWIGVKDGRYHLRHVCKDEDDLGTYGWTKHDGREFGHQLLADHGMTLATEFLKSKVGGSGYGGDWAVRISVHINKSEWNEEFGKGAQLFFYLADEGGNVLDLSREKLNIHEDSLLASGSRLDIGNWQLHLKSTDDLELHYSGFRTPHFHNLSDLVEENLASQIRNHARLQLSDSSVDSPNVLVFQIIGGFPFTTDIALLSGTGSESSRVDERVSQLTGTSLTSQLNDKKQAFDKKFEDVFSLAEKVDSESISVGKAAVGNLLGGIGYFYGQSVIAIPRTLDLKEHVKYVSYWPAELYTAVPGRSSFPRGFLWDEGFHQLLIWRWDIHISLDIIGHWLDLMNVDGWIPREQILGAEARSRVPEEFVPQHPTNGNPPTLFLALNDIVNGLKTNKFNSKDRSDISLFLERAFVRLEAWFQWFNTTQSGNQMGSYYWHGRDNKTIRELNPKTLSSGLDDYPRASHPSEDERHLDLRCWMSLAADCMHSIEELLDKETKPSKNYGSTAKLLSDLELINQMHFDVAYGAYFDFGNHTEKVQLKWKEVAVGHNQAARELVREVLERPKLRFVPHIGYVSLFPLMTRIIPSGSWILEKQLELISNRSLLWTDYGLRSLAKTSSMYMKRNTEHDAPYWRGTIWINMNYRILSALHHYSKENGPYQDRAKAIYEELRSNLIRNIVRNYRQSGYLWEQYDQVKGKGKGVHPFTGWTSLVTLIMAEAYEKI* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5534 856 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 83 854 IPR004888 GO:0004573|GO:0009311
Amo13g5534 856 Pfam Glycosyl hydrolase family 63 C-terminal domain 354 851 IPR031335 -
Amo13g5534 856 Pfam Glycosyl hydrolase family 63 N-terminal domain 111 272 IPR031631 -
Amo13g5534 856 Gene3D - 381 855 IPR012341 GO:0005975
Amo13g5534 856 MobiDBLite consensus disorder prediction 1 28 - -
Amo13g5534 856 Gene3D - 99 380 IPR038518 -
Amo13g5534 856 PANTHER ALPHA-GLUCOSIDASE 2 83 854 - -
Amo13g5534 856 MobiDBLite consensus disorder prediction 11 28 - -
Amo13g5534 856 SUPERFAMILY Six-hairpin glycosidases 365 853 IPR008928 GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5534 83 853 Glycoside Hydrolase AT1G24320 58.549 0.0 960
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5534 K01228 - gmx:100795691 1401.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5534 13 156838090 156846232 Amo13g5534 13 156838090 156846232 ECH