Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5530 ATGTTGGGAAAAGTGGTTCTCTCCTTCGTCTTTGTGCTCCTTCTCCTAATCTCATCCGCAATTTTCATTGGCCACCCCGATATTCGATCCCATTTCGTCCTAAAATCGCTTAATCAACCGGTTCAATGTGGACCCGAACCGCCTATTCGGGTTTACATGTACGATCTTCCACGCCGCTTTAACGTTGGCATGCTTAACAGCCAGAGCACGGAGGAGACTCCGGTAACCGCCAAGGACTTTCCGCCGTGGCCCGATAACTCTGGCCTGAGGAAGCAGCACAGCGTCGAGTACTGGATGATGGGCTCGCTCCTCTACGAACGCGACGGCGACAGCGTTGAAGACAGCAGAGATGCCGTTAGGGTTTCGGATCCGGAACTCGCGGACGCGTTCTTCGTCCCGTTCTTCTCGTCGCTGAGTTTCAACACGCATGGCCACACCATGACGGATCCGGATACCGAGTTTGATCGGCAATTGCAGGTTGATTTGATGGATATTTTGAAGAAGTCGGAATACTGGAAAAGGTCTGGAGGTAGAGACCATGTATTTCCCATGACACACCCCAACGCCTTTAGGTTCCTCCGAGATCAACTGAATGAATCTATTCAAGTTGTTGTGGATTTTGGCCGCTACCCCAAAAAAATGTCTAATTTGAACAAAGATGTGGTGTCACCCTATGTCCATGTTGTAGATTCTTATACTGACGACGATCTTCAAGATCCATATGAGGCTCGTTCCACGTTGCTTTTCTTCCGAGGCCGGACTTTGCGGAAGGATGAAGGCATTATCAGGGCAAAACTAGCAAAGGTGTTGGCTGGTATTAATGATGTTCACTATGAGCAAAGTTTTGCAACGGGAGAAAACATAAAAGCGTCAGCTCAAGGGATGCGTTCATCAAAGTTCTGTTTGGATCCAGCAGGAGACACACCATCATCTTGTCGTCTTTTTGATGCAATTGTCAGTCACTGTGTTCCTGTCATTGTGAGTGATCAAATTGAACTCCCCTTTGAGGATGAGATTGACTACACCAAGTTCTCGGTTTTCTTCTCTTTCAAAGAGGCATTGCAGCCTGGTTACATGGTCAATCAGCTTCGTCAATTTCCAAAGGAGAAATGGACCGAAATGTGGAGGCAGCTCAAAAACATCTCCCATCATTATGAATTCCAATACCCTCCAAAGAAAGAAGATGCTGTTAATATGTTGTGGAGACAGGTCAAGCACAAGATTCCTGCAGTCAAACTTTCTGTTCATAGAAGCCGAAGGTTAAAAGTCCCTGATTGGTGGCGGAGGAGGAGATGA 1296 0.4722 MLGKVVLSFVFVLLLLISSAIFIGHPDIRSHFVLKSLNQPVQCGPEPPIRVYMYDLPRRFNVGMLNSQSTEETPVTAKDFPPWPDNSGLRKQHSVEYWMMGSLLYERDGDSVEDSRDAVRVSDPELADAFFVPFFSSLSFNTHGHTMTDPDTEFDRQLQVDLMDILKKSEYWKRSGGRDHVFPMTHPNAFRFLRDQLNESIQVVVDFGRYPKKMSNLNKDVVSPYVHVVDSYTDDDLQDPYEARSTLLFFRGRTLRKDEGIIRAKLAKVLAGINDVHYEQSFATGENIKASAQGMRSSKFCLDPAGDTPSSCRLFDAIVSHCVPVIVSDQIELPFEDEIDYTKFSVFFSFKEALQPGYMVNQLRQFPKEKWTEMWRQLKNISHHYEFQYPPKKEDAVNMLWRQVKHKIPAVKLSVHRSRRLKVPDWWRRRR* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5530 431 Pfam Exostosin family 47 362 IPR040911 -
Amo13g5530 431 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 1 422 IPR004263 GO:0006486|GO:0016757
Amo13g5530 431 PANTHER EXOSTOSIN-LIKE 1 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5530 Amo-Chr13 156775070 156778350 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5530 - - mtr:MTR_8g080490 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5530 13 156775070 156778350 Amo13g5530 13 156775070 156778350 ECH