Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5141 ATGACGAGGCCAAGTTACCTAATTGTGGGAGAGAAGAAATGGGGAGATATTTTGTCATGGATTGCAATATCAACGACGCTCGTTATTGCAGTTGTGGATGGTAGAGAGTGCAGTTTTCCGGCCATATTCAACTTAGGGGACTCCAATTCAGACACGGGTGGCCTCACAGCAGCTTTTGGGCCTGCTCCGCCCCCCAATGGAATCACTTTTTTCCACTCCCCTGCCGGACGCTTCTCCGACGGTCGCCTCATCATTGATTTCATAGCTCAAAGCTTTGATTTGCCTTATCTGAGTGCTTACCTGGACTCTGTCGGCTCAAACTTCACTCACGGAGTGAATTTCGCAACCGCCGGATCCACTGTCAGACATCAGAATACCACGTTGTTTCAGAGTGGATATAGCCCCATCTCCCTTGATGTTCAGTCTGTGCAGCTCTCTGATTTCAAAGCAAGATCCAAACTGGCTCGCAAGCGAGGAAGCGTGTTTAGGGAATTGTTGCCCAAGGAGGAGTACTTTTCTGAGGCTTTATACACCTTTGACATTGGCCAAAATGATATCACTGCTGGCTACAAGCTAAATATGACCTCAGAGCAAGTGAAGGCATATGTACCTGATGTTTTGACCCAGTTCTCCAATGTCATAAGGAATGTGTATGAGGAAGGTGGAAGGTCGTTTTGGATCCACAACACAGGCCCACTCGGATGCCTACCTTACATGCTCGATCGCTATCCAATGAGTTCAGATCAAATAGACAAATCTGGATGCGCCAAACCCTTCAACCAGGTTGCACAGTATTTTAACCGCAAATTGAAAGACACGGTTATGCAGCTGAGGAAGCAGCTGCCCGAGGCAGCAATCACCTATGTTGACGTGTACAGAGTGAAGTACAGTCTCATAAGCAATGCCCAAAAATACGGTTTCAAGGATGGGGTGATAGCATGCTGTGGGCAGGGAGGGAAGTACAACTACAATAACGCTGCAAGATGTGGCGCCACCAAGGTCGAGAATGGAAAGAAGGTGCTGATCGCCAAGTCCTGCAAAGATCCAAGTGTCAGAATTATTTGGGATGGGATCCATTACACTGAAGCTGCCAATTACTGGATCTTCCAACAAATTGCCAATGGATCCTTTTCAGATCCACCCCTGCCTTTAAATATGGCTTGTGAATTTTGA 1173 0.4723 MTRPSYLIVGEKKWGDILSWIAISTTLVIAVVDGRECSFPAIFNLGDSNSDTGGLTAAFGPAPPPNGITFFHSPAGRFSDGRLIIDFIAQSFDLPYLSAYLDSVGSNFTHGVNFATAGSTVRHQNTTLFQSGYSPISLDVQSVQLSDFKARSKLARKRGSVFRELLPKEEYFSEALYTFDIGQNDITAGYKLNMTSEQVKAYVPDVLTQFSNVIRNVYEEGGRSFWIHNTGPLGCLPYMLDRYPMSSDQIDKSGCAKPFNQVAQYFNRKLKDTVMQLRKQLPEAAITYVDVYRVKYSLISNAQKYGFKDGVIACCGQGGKYNYNNAARCGATKVENGKKVLIAKSCKDPSVRIIWDGIHYTEAANYWIFQQIANGSFSDPPLPLNMACEF* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5141 390 Gene3D SGNH hydrolase 33 376 IPR036514 -
Amo13g5141 390 SUPERFAMILY SGNH hydrolase 44 374 - -
Amo13g5141 390 CDD SGNH_plant_lipase_like 40 376 IPR035669 -
Amo13g5141 390 Pfam GDSL-like Lipase/Acylhydrolase 42 372 IPR001087 GO:0016788
Amo13g5141 390 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 27 389 - -
Amo13g5141 390 PANTHER BNAA06G32900D PROTEIN 27 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5141 Amo-Chr13 151153036 151155409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g5141 40 386 Acyl Lipid Metabolism Gene Families AT4G10950 28.412 3.31e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5141 - - gmx:100803899 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g5141 13 151153036 151155409 Amo13g5141 13 151153036 151155409 ECH