Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4940 ATGGATCAAGAGTCTTCTCCTCACGAGGCCATGTTTCTGGTGTTAGGTTACCTTCCAGTCTACGAGCTTTTATTGATGTCTCAAGTTTGCAGGTCACTGAGAGATGCACTGAACAACGATGTGCTGCCATGGCTAAACATCCTTGTTCAAAGGCCTCTCAGTTCTCGACTCTCTGATCACACTCTCATCAACATCACCTCCAAGGCCAATGGTGGCCTCAAAACACTCTCTCTTATCAACTGCATCCACATCACGAACCACGGCCTTCAAACCCTCGTTCGTCAAAAYCCTCACATAACAAAGCTGCACATACCAGGATGCAGCAGCATAACCCCYGAMGGAGTCGTAGCAGCCGTGACAACACTCTGCCATGGAAGCAATTGCTTAAGAACCTTGAGAATTAACGGCATCTATAACCTAAACAGGGAGCATCTACGCACGCTGGCTTCTTGCCTTAACAACAACCTCCAATTAGAGCAGCAGCCTCTCTTCTATCACGAACGCCACAGAGAAAGGGAGAGGATTATTGATTTGGAGGCATGTCCCAAGTGCTATGAGGCGAGGGAGGTTTATGACTGCCCGAAAAGAGAGTGCGAGTGTAGAGCATGCAGTTTTTGTATTCCAAGATGTGAAAACTGTGGTGGCTGCATTGCATCAGAACAAGTGGAAGAGGCTGCTTGTTCAGATATCTTGTGCCTTAATTGCTGGTTACATGAGCATCCCAAATGCAGTTTCTGTAACAAGCCATACTGTAGGCAACACACTTCATGGTGGCCCAATTCTTCTGACTCTACATTCGTTTGTAGAGTTTGCCAAGAAAATTCAAGTGGATACACCTACATGGATGACTTTATGTAA 858 0.4615 MDQESSPHEAMFLVLGYLPVYELLLMSQVCRSLRDALNNDVLPWLNILVQRPLSSRLSDHTLINITSKANGGLKTLSLINCIHITNHGLQTLVRQNPHITKLHIPGCSSITPXGVVAAVTTLCHGSNCLRTLRINGIYNLNREHLRTLASCLNNNLQLEQQPLFYHERHRERERIIDLEACPKCYEAREVYDCPKRECECRACSFCIPRCENCGGCIASEQVEEAACSDILCLNCWLHEHPKCSFCNKPYCRQHTSWWPNSSDSTFVCRVCQENSSGYTYMDDFM* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4940 285 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 4 277 - -
Amo13g4940 285 SUPERFAMILY F-box domain 7 57 IPR036047 GO:0005515
Amo13g4940 285 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 200 211 IPR017900 -
Amo13g4940 285 ProSiteProfiles F-box domain profile. 1 47 IPR001810 GO:0005515
Amo13g4940 285 PANTHER F-BOX PROTEIN SKIP28 4 277 - -
Amo13g4940 285 SMART LRR_CC_2 70 95 IPR006553 -
Amo13g4940 285 SMART LRR_CC_2 96 121 IPR006553 -
Amo13g4940 285 Gene3D Ribonuclease Inhibitor 52 162 IPR032675 -
Amo13g4940 285 Pfam F-box domain 7 42 IPR001810 GO:0005515
Amo13g4940 285 SUPERFAMILY RNI-like 60 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4940 Amo-Chr13 148444556 148445705 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4940 - - lang:109340729 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4940 13 148444556 148445705 Amo13g4940 13 148444556 148445705 ECH