Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4939 ATGTATTATATATATATAGACAAGAAAGGATGTGATAATGGCACCTATCAACAAATAAATAATATATTTCCATTGTCTATATATATATTTTATTTTGTGCAGTCCAAAATACGAATTACTAATCCCAACCCAAAAAAATCACACACTACATTGATTGATATTAATTCCAGTAGCGTCATTATGTATCAAGCAGACGAATCAAAGCCTGTGACCGGTTTACCGGTGAGCTACAACAACGCTAGTAGCGGCACCGCGCCATATCCTTCCTCCGTCGACAGCAGCGCCTACTACCAGCCGCCACCTAGACCTCCTCAAGAATGGTCCACCAGCCTCTGTGACTGTTTCTCCGACTGCGGCAATTGTTGCATAACGTACTGGTGTCCATGTGTGACCTTTGGCAGAGTTGCTGAGATCGTTGATAGAGGATCTACCTCATGCGGTGCGAGTGGGGCACTGTACGCGCTGGTGTGTTGCCTGATTGGATGCGGATGCTTGTACTCGTGCTTCTACAGATCGAAGATGAGGCGGCAGTTGAATCTGAAAGGAAGTGACTGCGGGGATTGCATGRTCCATTGCTGCTGCGAGCCATGCGCCTTGTGCCAAGAATACCGTGAGCTTGAGATGCAAGGCTTTGACATGCACATTGGCTGGCATGGCAATGTCGAGCAGAGGAGCCGCGGTGTTGCCATGACTGCTCCTTCTGCTCCACCGCCTCAACCCCCCATAGTTCAAGTTCATTGTCCCAATTTAATGGAAGAGAATAGTACTGCTCAAGAAAATCCCAATTTGATGGAGCAGAATAGCACTATTCATGAAAGTCCCAATTTGATGGCACATAACAGTATTGCTCATAGTTATGAGAGGGATGATTCAAAAGATAACTTGTCCACTAGAGTGCAGTTAAGAAGGAGGAAAAGAAAATGGTCTTCATTGGAAGAGGAGACACTAAGAACCGGTGTAAAACCGTTTGGCCAAGGAAACTGGGGCAACCATGTAGACCCATGCCTATACTCATGCATCTACAGAACAAGGATGAGAAGRCAGTTTCTTTTGAAGGAGACTMTTTGCTTGGATTGCATCGTTCATTTCTTCTGTGAGCCATGCGCTCTCTGCCAAGAATATCGCGAGCTTCAGAACCGTGGATTTGACATGTCTCTTGGTTGGAACGGCAATCTTGACCGTTGGAACAACCAGATGGCTTCACACCAACAACAACCACCACCTGTTCTAAACATGACCCGTGGACCGACCAGAAGAAGAGAAGGGTTGGTGTTGTATGTTGAAGAGAGAGTTAGGAAGATGGAAGGAGCAGAGGTGGAGCTAGAGAAAAGAAGCTTGTTCCTGAAAAGCTTGATACAGAAGAAGAAATGCATAGAGCAACAAGAGCAGCATGACCATCTCCACAAAAACAATGTTAGAGTCAGAGCTTCTGATATGCCTCTCTCTTTGCAGAACCTTGCCTTTCGTTGTGCCCGCCATCACCTTGATTCCATGCCTTCCAACAAGCTTGACAGCAAACGTTTGGCTCTTGCCCTCAAGAAGGAGTTTGATTCTTCATACGGACCCGCTTGGCACTGCATTGTGGGAACTAGCTTTGGGTCCTATGTGACTCACTCTGTTGGTGGTTTCTTGTATTTTTCCATTGACAAGGTTTATATCCTTCTGTTCAAGACAGCTGTTGAACCATTAGACCGTTGA 1698 0.457 MYYIYIDKKGCDNGTYQQINNIFPLSIYIFYFVQSKIRITNPNPKKSHTTLIDINSSSVIMYQADESKPVTGLPVSYNNASSGTAPYPSSVDSSAYYQPPPRPPQEWSTSLCDCFSDCGNCCITYWCPCVTFGRVAEIVDRGSTSCGASGALYALVCCLIGCGCLYSCFYRSKMRRQLNLKGSDCGDCMXHCCCEPCALCQEYRELEMQGFDMHIGWHGNVEQRSRGVAMTAPSAPPPQPPIVQVHCPNLMEENSTAQENPNLMEQNSTIHESPNLMAHNSIAHSYERDDSKDNLSTRVQLRRRKRKWSSLEEETLRTGVKPFGQGNWGNHVDPCLYSCIYRTRMRRQFLLKETXCLDCIVHFFCEPCALCQEYRELQNRGFDMSLGWNGNLDRWNNQMASHQQQPPPVLNMTRGPTRRREGLVLYVEERVRKMEGAEVELEKRSLFLKSLIQKKKCIEQQEQHDHLHKNNVRVRASDMPLSLQNLAFRCARHHLDSMPSNKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVYILLFKTAVEPLDR* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4939 565 Pfam PLAC8 family 107 205 IPR006461 -
Amo13g4939 565 Pfam PLAC8 family 333 376 IPR006461 -
Amo13g4939 565 Gene3D - 298 332 - -
Amo13g4939 565 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 461 559 IPR037177 GO:0007017|GO:0030286
Amo13g4939 565 PANTHER DUF614 FAMILY PROTEIN-RELATED 334 398 IPR006461 -
Amo13g4939 565 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 334 379 IPR006461 -
Amo13g4939 565 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 106 208 IPR006461 -
Amo13g4939 565 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 1-RELATED 81 234 - -
Amo13g4939 565 Pfam Dynein light chain type 1 472 558 IPR001372 GO:0007017|GO:0030286
Amo13g4939 565 PANTHER DUF614 FAMILY PROTEIN-RELATED 81 234 IPR006461 -
Amo13g4939 565 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 1-RELATED 334 398 - -
Amo13g4939 565 SMART Dynein_light_2 467 558 IPR001372 GO:0007017|GO:0030286
Amo13g4939 565 SUPERFAMILY DLC 468 558 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4939 Amo-Chr13 148434409 148443659 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4939 - - gmx:100306298 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4939 13 148434409 148443659 Amo13g4939 13 148434409 148443659 ECH