Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4922 ATGTATTATATATATATAGACAAGAAAGGATGTGATAATGGCACCTATCAACAAATAAATAATATATTTCCATTGTCTATATATATATTTTATTTTGTGCAGTCCAAAATACGAATTACTAATCCCAACCCAAAAAAATCACACACTACATTGATTGATATTAATTCCAGTAGCGTCATTATGTATCAAGCAGACGAATCAAAGCCTGTGACCGGTTTACCGGTGAGCTACAACAACGCTAGTAGCGGCACCGCGCCATATCCTTCCTCCGTCGACAGCAGCGCCTACTACCAGCCGCCACCTAGACCTCCTCAAGAATGGTCCACCAGCCTCTGTGACTGTTTCTCCGACTGCGGCAATTGTTGCATAACGTACTGGTGTCCATGTGTGACCTTTGGCAGAGTTGCTGAGATCGTTGATAGAGGATCTACCTCATGCGGTGCGAGTGGGGCACTGTACGCGCTGGTGTGTTGCCTGATTGGATGCGGATGCTTGTACTCGTGCTTCTACAGATCGAAGATGAGGCGGCAGTTGAATCTGAAAGGAAGTGACTGCGGGGATTGCATGGTCCATTGCTGCTGCGAGCCATGCGCCTTGTGCCAAGAATACCGTGAGCTTGAGATGCAAGGCTTTGACATGCACATTGGCTGGCATGGCAATGTCGAGCAGAGGAGCCGCGGTGTTGCCATGACTGCTCCTTCTGCTCCACCGCCTCAACCCCCCATAGTTCAAGTTCATTGTCCCAATTTAATGGAAGAGAATAGTACTGCTCAAGAAAATCCCAATTTGATGGAGCAGAATAGCACTATTCATGAAAGTCCCAATTTGATGGCACATAACAGTATTGCTCATAGTTATGAGAGGGATGATTCAAAAGATAACTTGTCCACTAGAGTGCAGTTAAGAAGGAGGAAAAGAAAATGGTCTTCATTGGAAGAGGAGACACTAAGAACCGGTGTAAAACCGTTTGGCGAAGGATACTGGGCGTGTGCAATAAGCGGGGCACTGTATGCGATGATATTGTTTTTCATTGGAAGCCCATGCCTATACTCATGCATCTACAGAACAAGGATGAGAAGACAGTTTCTTTTGAAGGAGACTCTTTGCTTGGATTGCATCGTTCATTTCTTCTGTGAGCCATGCGCTCTCTGCCAAGAATATCGCGAGCTTCAGAACCGTGGATTTGACATGTCTCTTGGTTGGAACGGCAATCTTGACCGTTGGAACAACCAGATGGCTTCACACCAACAACAACCACCACCTGTTCTAAACATGACCCGTGGACCGACCAGAAGAAGAGAAGGGTTGGTGTTGTATGTTGAAGAGAGAGTTAGGAAGATGGAAGGAGCAGAGGTGGAGCTAGAGAAAAGAAGCTTGTTCCTGAAAAGCTTGATACAGAAGAAGAAATGCATAGAGCAACAAGAGCAGCATGACCATCTCCACAAAAACAATGTTAGAGTCAGAGCTTCTGATATGCCTCTCTCTTTGCAGAACCTTGCCTTTCGTTGTGCCCGCCATCACCTTGATTCCATGCCTTCCAACAAGCTTGACAGCAAACGTTTGGCTCTTGCCCTCAAGAAGGAGTTTGATTCTTCATACGGACCCGCTTGGCACTGCATTGTGGGAACTAGCTTTGGGTCCTATGTGACTCACTCTGTTGGTGGTTTCTTGTATTTTTCCATTGACAAGGTTTATATCCTTCTGTTCAAGACAGCTGTTGAACCATTAGACCGTTGA 1737 0.4577 MYYIYIDKKGCDNGTYQQINNIFPLSIYIFYFVQSKIRITNPNPKKSHTTLIDINSSSVIMYQADESKPVTGLPVSYNNASSGTAPYPSSVDSSAYYQPPPRPPQEWSTSLCDCFSDCGNCCITYWCPCVTFGRVAEIVDRGSTSCGASGALYALVCCLIGCGCLYSCFYRSKMRRQLNLKGSDCGDCMVHCCCEPCALCQEYRELEMQGFDMHIGWHGNVEQRSRGVAMTAPSAPPPQPPIVQVHCPNLMEENSTAQENPNLMEQNSTIHESPNLMAHNSIAHSYERDDSKDNLSTRVQLRRRKRKWSSLEEETLRTGVKPFGEGYWACAISGALYAMILFFIGSPCLYSCIYRTRMRRQFLLKETLCLDCIVHFFCEPCALCQEYRELQNRGFDMSLGWNGNLDRWNNQMASHQQQPPPVLNMTRGPTRRREGLVLYVEERVRKMEGAEVELEKRSLFLKSLIQKKKCIEQQEQHDHLHKNNVRVRASDMPLSLQNLAFRCARHHLDSMPSNKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVYILLFKTAVEPLDR* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4922 578 Pfam PLAC8 family 107 205 IPR006461 -
Amo13g4922 578 Pfam PLAC8 family 329 389 IPR006461 -
Amo13g4922 578 Pfam Dynein light chain type 1 485 571 IPR001372 GO:0007017|GO:0030286
Amo13g4922 578 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 1-RELATED 325 411 - -
Amo13g4922 578 PANTHER PROTEIN PLANT CADMIUM RESISTANCE 1-RELATED 81 234 - -
Amo13g4922 578 PANTHER DUF614 FAMILY PROTEIN-RELATED 81 234 IPR006461 -
Amo13g4922 578 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 474 572 IPR037177 GO:0007017|GO:0030286
Amo13g4922 578 SUPERFAMILY DLC 481 571 IPR037177 GO:0007017|GO:0030286
Amo13g4922 578 PANTHER DUF614 FAMILY PROTEIN-RELATED 325 411 IPR006461 -
Amo13g4922 578 SMART Dynein_light_2 480 571 IPR001372 GO:0007017|GO:0030286
Amo13g4922 578 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 326 392 IPR006461 -
Amo13g4922 578 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 106 208 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4922 Amo-Chr13 148232172 148240727 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4922 - - gmx:100306298 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4922 13 148232172 148240727 Amo13g4922 13 148232172 148240727 ECH