Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4884 ATGAGGAAGCATGGATGGCAGTTACCTTATCATCCACTCCAGGTGGTGGCTATTGCAGTGTATTTGTCTCTGGGGTTTGCCTTCTATGTCTTCTTCGCTCCTTTTGTTGGTAAGAAGATGTATCAGTATGCTGTCATGGGACTCTACACGCCGCTGATTACTTGTGTCTTTGGATTGTACATTTGGTGTGCAGCAACAGATCCAGCAGATCCAGGGGTTTTCAAATCCAAGAAGTATCTCAAAATCCCATACAGTGAGAAACATAGTGAACCAAAGAATTCTAAATTAGGAGGAGAATCAACCTCTTCGATACACGGTGCAAATGCTTCAACGGTTGGAGCAATGTCTGTGGACAAGGAGGCACCTGGAACAGAAGGAACTATGAAAGATGCTTCTGATTCAGTAGAGAAGAAGAATGCATCGTCATGTCTTCTCTTGGTATGCTCTCCTTGTGCATATGTCTGCAGCTGCTCTAGCTCAAGCAAGGAATCTTGTGATAAGCAAATAAGCGAAGATGGCATGTTCTATTGCAGCTTGTGTGAAGTTGAGGTCTTCAAGTACAGCAAGCACTGTAGAGTTTGCGACAAGTGTGTAGATCACTTCGATCATCATTGCAGATGGCTTAACAATTGTATAGGGAAAAGAAACTACCGGCAATTTTTTGCTCTCATGGTTGTTGCTATCCTCTTGCTTATTCTTCAATGGTTGACTGGGATATTTGTGCTTATCTATGGTTTTGTTGAGAGAAAGCAATTTTCTGCTGACATCTCCTCCAAGTTGGGAAGTAGTTTCTCTATTGTTCCCTTTGTCATTGTGGTGTCTGTTTGCACCATTCTGGCTATGATTGCTACCTTGCCTGTTGCACAGCTTTTCTTCTTTCACATCCTCCTTGTTGAAAAGGGAATCAGCACTTATGATTACATCATAGCTCTGAGGGAGCAAGAGCAGGAGCAGCAAGGAGTTGGTGGTCAACAAAGTCCTCAAATGTCAACTGTCAGCTCACTTACTGGATTCAGCAGTGCGAGCTCCTTCACTACGTTCCAGCGTGGTTCGTGGTGCACACCACCACGCCTGTTCGTTGAAGATCAGTTTGACGTAATCCCACCAGAAACCGGTTCCGTAAGCTCACTTGGAAAGAAGAGTATTAGAGAAGAACCATCTAAGAGAAAGAATCCTGGAGCAGTCAAAATTAGTCCTTGGACATTGGCGCGATTAAATGCAGAAGAGGTTTCCAAGGCTGCTGCTGAAGCAAGAAAAAGGTCCAAAATTCTGAAGCCTGTGGTGAGACACAATGATGCTTTCAGACTAGAGCCAGAGAGCAGTTTTGGTAGCCGGGGTCGACAAGTCCCCAGAATCGACAACAAACGGCGCGCTGCCAGCAAGCAGGGTTTCCTTCCTGCTGACATAGCTATGGCTTCCATGACAAATGTTTCTGCAAATAATATTGGTAAAGGATTCAGTGGAGTGTCTAGCTTAGCCCCTCTTCAACTTGAACCACGCAGCGCATTTCATATGAGTCAAGCAATGTCAAGCTCAGCTGCGAATGTTGTGACTTCTTCTGAAAGCAGTATAGAGTCTCCCGATATCCACCCTTTCCGGGTGTCTTCGTCAAGAATCGAAGAGGCTAGACAGCTTGCTGGTCCTTCGGCTGCTGGTGGCAGTGTTGCAAATTTGAACGGAATTCCACTGTCAAGGTCAACTAGCGACGGGTATGAAGCCTCAGGCGGGGAAGATAGCGATCAACTTCCTAGTAGAATTGTTGAGAGATCCACAAATTGGACTAATCTTCTTTTCAACCCTGATCAAGATGAGAGAGCTTTTAGGCACAAATCTTCGTCCAACGTGGTTTATAGCAGAAAATTCTAA 1866 0.4496 MRKHGWQLPYHPLQVVAIAVYLSLGFAFYVFFAPFVGKKMYQYAVMGLYTPLITCVFGLYIWCAATDPADPGVFKSKKYLKIPYSEKHSEPKNSKLGGESTSSIHGANASTVGAMSVDKEAPGTEGTMKDASDSVEKKNASSCLLLVCSPCAYVCSCSSSSKESCDKQISEDGMFYCSLCEVEVFKYSKHCRVCDKCVDHFDHHCRWLNNCIGKRNYRQFFALMVVAILLLILQWLTGIFVLIYGFVERKQFSADISSKLGSSFSIVPFVIVVSVCTILAMIATLPVAQLFFFHILLVEKGISTYDYIIALREQEQEQQGVGGQQSPQMSTVSSLTGFSSASSFTTFQRGSWCTPPRLFVEDQFDVIPPETGSVSSLGKKSIREEPSKRKNPGAVKISPWTLARLNAEEVSKAAAEARKRSKILKPVVRHNDAFRLEPESSFGSRGRQVPRIDNKRRAASKQGFLPADIAMASMTNVSANNIGKGFSGVSSLAPLQLEPRSAFHMSQAMSSSAANVVTSSESSIESPDIHPFRVSSSRIEEARQLAGPSAAGGSVANLNGIPLSRSTSDGYEASGGEDSDQLPSRIVERSTNWTNLLFNPDQDERAFRHKSSSNVVYSRKF* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4884 621 MobiDBLite consensus disorder prediction 371 394 - -
Amo13g4884 621 ProSiteProfiles DHHC domain profile. 175 225 - -
Amo13g4884 621 Pfam DHHC palmitoyltransferase 175 308 IPR001594 GO:0016409
Amo13g4884 621 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 8 531 - -
Amo13g4884 621 MobiDBLite consensus disorder prediction 439 458 - -
Amo13g4884 621 PANTHER S-ACYLTRANSFERASE 8 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4884 Amo-Chr13 147773664 147779769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4884 170 306 Lipid Metabolism Gene Families AT4G22750 30.137 5.64e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4884 K20027 - gmx:100803007 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4884 13 147773664 147779769 Amo13g4884 13 147773664 147779769 ECH