Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4873 ATGGACCAATCCACTACCTCCTCTTTCTGCAACTTAGGGATTCTCGATTCCCTCTCCAACGATTCCATATGCGAAATCCTCCGCTCCTACAATGGTTTCTGTGCCGCCACTCAAACCCTCCTCGCCGCCGTGGACGACCTATCCGCCCGCCGCGACTTCGTTGCCTATGTTCACTCCCTCTGCAAATATGGCCTCGATTCCCTCGTCCGAGACCACTTTCTTCGCGTTTTGGAGGAAACGTTTGAGAGAAATGGGGCGTCGAGGTTTTGGCGCCATTTTGAGCCTTACAGTAATGTTACGGGTTTGAACAAGAATGATGATCTTGAGATTGACGAGGACGAGATTCTGAGTGTGTTGCATAGTGCTTTGGAAGAAATCTATTTGGAGAAAGGGTATCAGGAGAAGTGCTTGTTAATGTTGGTCCATGCTTTCCAATCATACAAGAAGCAGGTGTCCAGGGACACTCGTGATCTTGATGCAGAGAGGAATCACCTTACCACTAAATATCAATGGATTGTCTCCTCTGTACTTACGGCTACGCTTCCTAGGAATTTCCGTGTTATACTGCATTGGTATTTTAAAAGAACATTGGAGGAGTTAAGTACAAGGATGGATGAGGAGTTGCAAGATCATGAATCTCAAAGCAAGGATGGCATGGATTTAGACGAAAAAGGAAAAATATGCAACAAGGTTGGCGAAATGGATGTTGATGAATGCTATAATGACAGCAGGTACTCAGAAAACAATAAACTTGTGAATAGCATTGGAAAAGTTGTTCTTCATCTAAGAAGTCTTGGATTTACTTCTATGGCAGAAGATGCTTATGCCTCTGCTATATTTTTACTTCTAAAGGCAAAAGTATATGATTTAGCTGGTGATGATTTTAGGAGTTCTGTTCTACAGTCTATTCAAAGCTGGATACAGGCTGTACCTCTCAAGTTTCTGCATGCCCTTCTTGTCTATCTTGGAGATTCTGTTAGTTATGAGAGTTCTTCTTCAGGTCTCAAATCACCTTTAGCATCACAACCATCCTCATTCTGTCCTGGAATCGATTCTCCTTCTGAAGGGCTTGTTAGATGGAAGCTGCGGCTGGAATATTTTGCTTATGAAACACTGCAAGATTTAAGAATTTCCAAATTATTTGAGATTATCGTTGATTATCCTGAGAGCTCTCCTGCAATTGAAGACTTAAAATTGTGTCTTGAATACACTGGACAACATTCAAAGCTGGTCGACTCATTTATTTCTTCACTTCGTTATCGCTTGCTCACTGCAGGCGCATCAACCAATGATATATTGCACCAATATGTTTCAACCATTAAAGCCCTGAGGACAATAGACCCTGCAGGTGTTTTCCTTGAGGCTGTTGGTGAACCAATAAGGGATTATTTAAGAGGAAGGAGAGATACCATAAAATGCATAGTGACCATGTTGACAGATGGGACTGGTGGGAATTCTAGTGCATCTGGAAATCCTGGAGATAGCCTTCTTGAAGAGCTGAACAGAGATGAAGAAATTCAAGAGGATGTTGGTATTGACGATGATTTTAACACTGATGATAGGCAAGCATGGATTAATGCTGCACGCTGGCAGCCTGACCCTGTGGAAGCAGATCCACTAAAAGGAAGCAGAAACCAAAGGAAAGTTGACATACTTGGAATGATTGTTGGCATTATTGGTTCAAAAGATCAATTAGTTCATGAATATCGAACTATGCTTGCTGAGAAACTTCTAAATAAATCTGATTATGATATTGACTCAGAGATTCGGACTTTAGAACTCCTCAAGATACACTTTGGAGAGAGCAGCCTACAAAAATGTGAGATTATGCTCAATGATTTACTTGGCTCAAAGAGAACTAATACAAACATCAAAGCTACCATAAGTCAACCATCTCAGACAAGTGGAGAAAATGCAATATCCATGGATACGATTTCTGCCACTATCATATCTTCTAATTTTTGGCCTCCAATACAGGATGAGCCAGTTAACCTGCCAGAATCTGTCGACCAGCTCCTTACTGAGTATGCAACTAGATTTCATGAAACAAAAACCCCTCGTAAGCTACAGTGGAAAAAAAGTCTTGGGACTGTCAAGTTGGAGTTGCAGTTTGATGATAGGATAATGCAGTTCACAGTGGCCCCTGTACATGCATCAATCATTATGCAATTTCAAGATCAAAAGAGTTGGACTTCTAAAAACCTTGCGGCTGCTATTGGAATCCCAGTGGATGCACTGAGTAGGAGAATACATTTTTGGATAAGCAAGGGGATCATTTCAGAGTCGGCTGGGGTAGATACCTCAGATCATGTATACACCATTATGGAAAGCATGGCTGAGACAAGTAAGAATGGAGCTGGTAGTAGTGGTATCCAGGAACTTCTAGGGGGCGATGAGGAAGAAGAAAGATCCGTCTCCTCTGTGGAGAATCAACTTCTTAAGGAGATGACTGTATATGAGAAATTTATCATGGGCATGCTCACAAACTTTGGTAGCATGGCACTAGATCGAATTCACAATACACTCAAGATGTTTTGTATTGCTGATCCCCCATATGACAAGTCACTCCAACAGTTACAAAGCTTTTTATCAGGTCTAGTCTCTGAGGAGAAATTAGAGCTTAGGGATGGAATGTACTTTCTAAAGAAGTAA 2652 0.4159 MDQSTTSSFCNLGILDSLSNDSICEILRSYNGFCAATQTLLAAVDDLSARRDFVAYVHSLCKYGLDSLVRDHFLRVLEETFERNGASRFWRHFEPYSNVTGLNKNDDLEIDEDEILSVLHSALEEIYLEKGYQEKCLLMLVHAFQSYKKQVSRDTRDLDAERNHLTTKYQWIVSSVLTATLPRNFRVILHWYFKRTLEELSTRMDEELQDHESQSKDGMDLDEKGKICNKVGEMDVDECYNDSRYSENNKLVNSIGKVVLHLRSLGFTSMAEDAYASAIFLLLKAKVYDLAGDDFRSSVLQSIQSWIQAVPLKFLHALLVYLGDSVSYESSSSGLKSPLASQPSSFCPGIDSPSEGLVRWKLRLEYFAYETLQDLRISKLFEIIVDYPESSPAIEDLKLCLEYTGQHSKLVDSFISSLRYRLLTAGASTNDILHQYVSTIKALRTIDPAGVFLEAVGEPIRDYLRGRRDTIKCIVTMLTDGTGGNSSASGNPGDSLLEELNRDEEIQEDVGIDDDFNTDDRQAWINAARWQPDPVEADPLKGSRNQRKVDILGMIVGIIGSKDQLVHEYRTMLAEKLLNKSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLLGSKRTNTNIKATISQPSQTSGENAISMDTISATIISSNFWPPIQDEPVNLPESVDQLLTEYATRFHETKTPRKLQWKKSLGTVKLELQFDDRIMQFTVAPVHASIIMQFQDQKSWTSKNLAAAIGIPVDALSRRIHFWISKGIISESAGVDTSDHVYTIMESMAETSKNGAGSSGIQELLGGDEEEERSVSSVENQLLKEMTVYEKFIMGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSEEKLELRDGMYFLKK* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4873 883 SUPERFAMILY Cullin homology domain 529 762 IPR036317 -
Amo13g4873 883 SMART APC2_2 822 881 IPR014786 -
Amo13g4873 883 Gene3D Cullin; Chain C, Domain 2 643 783 - -
Amo13g4873 883 Gene3D - 798 883 IPR036388 -
Amo13g4873 883 Gene3D Cullin Repeats 532 630 - -
Amo13g4873 883 SUPERFAMILY "Winged helix" DNA-binding domain 812 882 IPR036390 -
Amo13g4873 883 ProSiteProfiles Cullin family profile. 554 754 IPR016158 -
Amo13g4873 883 Pfam Cullin family 548 751 IPR001373 GO:0006511|GO:0031625
Amo13g4873 883 SMART cul_2 550 704 IPR016158 -
Amo13g4873 883 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 2 15 883 IPR044554 -
Amo13g4873 883 MobiDBLite consensus disorder prediction 783 802 - -
Amo13g4873 883 Coils Coil 194 217 - -
Amo13g4873 883 PANTHER BNAC04G32030D PROTEIN 15 883 - -
Amo13g4873 883 Pfam Anaphase promoting complex (APC) subunit 2 822 879 IPR014786 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4873 K03349 - gmx:100785428 1421.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4873 13 147580457 147592079 Amo13g4873 13 147580457 147592079 ECH