Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4844 ATGGCGAAACCAAGTTCAGCTGATGGCAGGACTAGAAGCACTGTGCAGATCTTTATAGTAGTTGGTCTCTGCTGTTTCTTCTATATATTGGGAGCGTGGCAGAGAAGCGGTTTTGGAAAGGGRGATAGCATAGCATTGCAGATTACCAAGAGTAATACAGAATGTGAGATAGTACCAAATTTAAGTTTTGACTCCCACCATAGTGGAGAACTTAGCAAACTTGATGAAGCTGATTCGAAACCTAAGGTGTTTCAACCATGCAAAGCAAAATATACTGATTATACCCCCTGCCAAGATCAACGGCGAGCAATGACCTTCCCTAGAGAGAACATGATCTATCGAGAGAGACATTGCCCACGTGAAGAAGAGAAGCTGCATTGTTTGATTCCAGCGCCCAAGGGGTATGTTACTCCGTTTCCATGGCCAAAGAGTCGTGATTATGTTCCATATGCAAATGCTCCGTACAAGAGTCTTACAGTTGAGAAGGCTATTCAGAATTGGATCCAATATGAGGGAAATGTGTTCAGATTCCCTGGTGGTGGAACCCAGTTTCCTCAAGGCGCTGATAAATATATTGATCAACTTGCATCTGTGATACCTATAGCTAATGGGACAGTGAGGACTGCGCTAGATACTGGTTGTGGGGTTGCAAGTTGGGGTGCGTATCTTTGGAGCAGAAATGTTATTGCCATGTCATTTGCACCAAGGGATTCTCATGAAGCACAAGTTCAATTTGCTCTTGAAAGGGGTGTACCTGCTGTAATTGGTGTTTTGGGAACCATAAAGTTGCCTTATCCATCTCGAGCCTTTGACATGGCTCACTGTTCTCGCTGTTTGATTCCTTGGGGAGCAAATGGTGGAATATATATGATGGAAGTTGATCGAGTCCTAAGACCTGGCGGTTACTGGGTGCTTTCGGGCCCTCCAATCAATTACAGGGTTAATTACAAAGCCTGGCAGAGACCAAAGGAGGACCTTGAGGATGAACAAAACAAGATTGAAGAGATTGCTAAGAAACTTTGCTGGGTGAAGAGGTCTGAGAGGGCTGAGATTGCTGTTTGGCAAAAGACTATGGATTCTGAGTCATGTCGACGCAAACAAGAAGATGCCGGTGTAAATTTTTGTGAATCTTCAGATACTGATGATGTCTGGTACAAGAAAATGGAGGCCTGCGTTACCCCAAGTCCTAAAGTTTCAGCTGGAGATCTTAAACCATTTCCGAGCAGGTTATATGCCATTCCCCCTAGAATTGCTAGTGGCTTGGTACCTGGAGTTTCTTCCGAGACATACCAAGATGATAACCAAAAGTGGAAAAAACATGTAAATGCCTACAAGAAAATTAATAGACTGTTGGATACCGGAAGATATCGAAACATTATGGATATGAATGCTGGGTTGGGTAGTTTTGCTGCAGCTATTCAATCTCCCAAGTTATGGGTCATGAACGTTGTGCCTACCACAGCTGAGAAAAGTACCCTGGGGGTCATATATGAGCGCGGCTTGATTGGCATTTATCATGATTGGTGTGAAGCCTTTTCAACATATCCAAGGACATATGATCTCATTCATGCCAATGGCCTCTTTAGTCTGTACAAGGATAAATGTAATGCAGAAGACATTCTTCTGGAGATGGACCGGATCTTGCGGCCGGAAGGCGCCGTCATATTCCGCGATGAAGTCGATACCTTAATAAAGGTAAAGAAAATAGTTGCAGGAATGAGATGGGATACCAAAATGGTTGACCATGAAGATGGTCCTCTTGTTCCTYAGAAGATACTAATTGCTGTAAAGCAGTATTGGGTTGTTGATGGAAATTCCACTTCTACACAATAA 1833 0.4343 MAKPSSADGRTRSTVQIFIVVGLCCFFYILGAWQRSGFGKGDSIALQITKSNTECEIVPNLSFDSHHSGELSKLDEADSKPKVFQPCKAKYTDYTPCQDQRRAMTFPRENMIYRERHCPREEEKLHCLIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQLASVIPIANGTVRTALDTGCGVASWGAYLWSRNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSRAFDMAHCSRCLIPWGANGGIYMMEVDRVLRPGGYWVLSGPPINYRVNYKAWQRPKEDLEDEQNKIEEIAKKLCWVKRSERAEIAVWQKTMDSESCRRKQEDAGVNFCESSDTDDVWYKKMEACVTPSPKVSAGDLKPFPSRLYAIPPRIASGLVPGVSSETYQDDNQKWKKHVNAYKKINRLLDTGRYRNIMDMNAGLGSFAAAIQSPKLWVMNVVPTTAEKSTLGVIYERGLIGIYHDWCEAFSTYPRTYDLIHANGLFSLYKDKCNAEDILLEMDRILRPEGAVIFRDEVDTLIKVKKIVAGMRWDTKMVDHEDGPLVPXKILIAVKQYWVVDGNSTSTQ* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4844 610 Gene3D Vaccinia Virus protein VP39 159 381 IPR029063 -
Amo13g4844 610 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 606 IPR004159 GO:0008168
Amo13g4844 610 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 597 IPR004159 GO:0008168
Amo13g4844 610 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 443 559 IPR029063 -
Amo13g4844 610 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 320 IPR029063 -
Amo13g4844 610 PANTHER METHYLTRANSFERASE PMT2-RELATED 5 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4844 Amo-Chr13 146988588 146993141 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4844 - - gmx:100796104 1150.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4844 13 146988588 146993141 Amo13g4844 13 146988588 146993141 ECH