Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4843 ATGGTTAGTACCATACCATCCACTTCTAAGACCAACCTCTATAATACTAAGTTGCAAAACTTCAACTCTGATGATGCAATTTTCTCTCCATACTTAAACAAGAACCAAGGAACAAGCCAAAAACTTAGTCCCTWTATCAGAAGGGATTCATTTCAGCACCACCATGGTGAAAAGAAGAAGGAGGAAGACGGCGAAATCGGAGTATTCGGTGCAGAAAAATACTTCAATGAWGGTGAGGTTGATTCCTCATCAGTAGCTTCTTCAAGCATAGCTACTTCAAAGTACTTGCACCAACACAYAGATCACCATCAAATAGCTCAAGAATCTTATGGAACTCCGAGTATTCGCTCTGAATCAACATGTAACAGCCAAAGTGCACTCTTACACAGTGCTATGATGATGAGGAACTCTCAAAGGAACAACAAGAACAAGAACATGAACAACAACAACAACAACAAGGCACTGGCAAAGAGTTTTCTTGCTGGTATTGGCATCAAATGTTCTTGTTCCGACAAGAATTCTGTTGAGATCAATGATCATGCAGGCGAAATCAGCTTCAGCAAAACSGCTATCTATGATGTTTATCTTGGAAAAACAGTACCAAGAAAGATCTTAAATTCTGGTGCAGATTCTGATACTCATTCACCTAAAATCTCAAAGCCAGTTGAGAAGTTCATTGGTGTTGGATTGAACAAAGATTTCCCATTTTCACCTGTGAGTTCTTCTTCTGGTTTGGGAAATCATTTTGTGAAAATGCAAATCCAATCATCACAAGCACAAGAAGAAGGAAAAGAAGAAGAAGAAGAAGAAGAGGAGCCAAGAAAATCACTTGCAGTGTTTGGTTCTCCAATTCTGAGTCACAAGAGCAAGTCCTCAAGCTTTGACAAAAAACTAAGAATCCCAAAAAGAATGGAAGATATTATTGATCATCACAAGCATAATCATTTGGGTGCTAATTCAGGTTCAAACTTCAATGATGCTGCAAGCGATGCAAGCTCAGATCTGTTRGAGATTGAAAGCATCAAAGGCAATAATTCATTTCTTGCAAGACAAGCAACATCAYGGTGTGGAAGCCCCACAGGCTATGCACCAAGTGAAGCAAGCATAGAATGGAGTGTGGTCACTGCAAGCGCCGCCGTGATGTCGGATTGCGACGAGCAGATGTCTGAGGTAACTGTAAGGAGTCCAATAAGAGTGCCGGTGGCAGCATCATCTTCAAGAAGGGAGACACAGAGGCGGCGCAGCCACGGCATGCTTTTGGGTGGCTGCAAGAGCCATAAAGCAGTTAGAGTTGCCGGTGATGCTTTCATAACATATGAGAAGCCAAATTCTAATGTTAATAGTCCACAAAGTCGGCACCATAGAATCAGTAATAGCTCCTCTCACTCTCAGCTTGCAAGGTTTCAAAAAGAGTCATCAAAGGTTGCAAGGCATGCATATGCTGCAACTCCACCCTCACAACTACTATACAAATAG 1476 0.414 MVSTIPSTSKTNLYNTKLQNFNSDDAIFSPYLNKNQGTSQKLSPXIRRDSFQHHHGEKKKEEDGEIGVFGAEKYFNXGEVDSSSVASSSIATSKYLHQHXDHHQIAQESYGTPSIRSESTCNSQSALLHSAMMMRNSQRNNKNKNMNNNNNNKALAKSFLAGIGIKCSCSDKNSVEINDHAGEISFSKTAIYDVYLGKTVPRKILNSGADSDTHSPKISKPVEKFIGVGLNKDFPFSPVSSSSGLGNHFVKMQIQSSQAQEEGKEEEEEEEEPRKSLAVFGSPILSHKSKSSSFDKKLRIPKRMEDIIDHHKHNHLGANSGSNFNDAASDASSDLLEIESIKGNNSFLARQATSXCGSPTGYAPSEASIEWSVVTASAAVMSDCDEQMSEVTVRSPIRVPVAASSSRRETQRRRSHGMLLGGCKSHKAVRVAGDAFITYEKPNSNVNSPQSRHHRISNSSSHSQLARFQKESSKVARHAYAATPPSQLLYK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4843 491 MobiDBLite consensus disorder prediction 252 281 - -
Amo13g4843 491 MobiDBLite consensus disorder prediction 47 65 - -
Amo13g4843 491 MobiDBLite consensus disorder prediction 35 65 - -
Amo13g4843 491 MobiDBLite consensus disorder prediction 442 470 - -
Amo13g4843 491 MobiDBLite consensus disorder prediction 442 491 - -
Amo13g4843 491 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED 6 474 IPR039615 GO:0009638
Amo13g4843 491 PANTHER PROTEIN PHYTOCHROME KINASE SUBSTRATE 1 6 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4843 Amo-Chr13 146984652 146986140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4843 - - adu:107481087 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4843 13 146984652 146986140 Amo13g4843 13 146984652 146986140 ECH