Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4829 ATGTTCATTCCACTTCTATGTCTGAAAGTTGGGAAGCGCTTTGGAATGGCTCTTTATAGAAACAATGGTGAATTGCTCACCGAGAGAAGGGGCATCATTGATGCGGTTGTCAATTCTCTTGGTAAAAGTGACCATGGCTCGCGAATCTTGCGTCGTGGTAGAAGGCTTGGTCGGATTACCAAGCACAAACTTTCGCGTTGGCTTCTCCTTCTTACTGCACTCTTTTCAGTTTATTTCACAGTTTGTGGCCTGAAAATGTTTATTCACGTATACGGGAAGGGCTCAACCTACACAGTAAACATGAAGAGCTCAACCTACACAGTATACACAAAGAGCTCAACCTTCAAGAAACTGTTTCATTATCTGAATTTGGAAAACTACCACCTAAAAGCAAGCGCAGGAAGCTCAGTAGATGGCCTTGCTGAACCCAAGAATTACATGAATTTCACTTGGTTTTCTCTAGATTATGTTAAACAAGAAGGAAAAACATCCGATAGTGGTTTGTTTGAACCTCGATTTGGAGGACATCAGACTCTTGAGGAGAGAGAAAAGTCATTTTATGCCAAAAACCAAATGGTTCATTGTGGTTTTGTCAAGGGATCACCAGGGTATTCAAGCACTGGATTTGATTTAGATGAAAAAGATAAGGCATACATGTCAAAGTGTAAGATTGCAGTTTCTTCTTGCATTTTTGGAAGCTCCGATTTTCTCCGGAGGCCTACAAGTAGACTGATTAGTCAATATTCAAAGAACAATGTTTGTTTTGTGATGTTCTTGGATGAACAAACACTATCCAAACTGTCATCAGAAGGGAACAGTCCCGATGAAAGAGGGCATATTGGCCTATGGAAAGTAGTAGTTGTGAAAAACTTGCCATATGAAGACATGCGGAGGACTGGCAAAGTGCCTAAATTTTTAGCACACCGCCTCTTCCCAAATTCAAGGTATTCAATTTGGCTTGACAGCAAGATGAGACTGAATGCTGATCCTATGAATGCTGAATTTGCCATTTCAAATCATTATGACCGCCACTGTGTCTGGGATGAGGTGCTCCAAAACAAACGCTTAAACAAGTACAACCACACGGCAATTGACGAACAGTTTAACTTTTACCAATCTGATGGCCTAACCAAGTTTGATCCTTCAAACCCAAATAATCCTCTTCCAAATGTTCCTGAGGGTTCCTTGATAATAAGGGCACATACACCAATGTCAAATTTATTTTCATGCCTTTGGTTCAATGAAGTTGATCGATTTACTTCTCGAGATCAACTAAGCTTTGCTTATACTTATTTGAAATTGAGGAGGATGAATCCGGAGAGACCATTTCAAATGGCAAACAGAATGACAGAAAAAGAAAGGTCAAATGTTGAGTTCAAGGCTTTGTTGATGGAGCGCATTGCGTTGGTTTTCATCGCCATCGTCACTGCTTCAATATGGTGGCCATGTGCAGCACACAACGTGGCCACTTGCCCTAGCACTGATGATCCTCACACGTGGTCGTTTATTTCTCTGGTGCTGTTTACCTACACCATCATGCCCGCATTCTACGTGTTCCGGTGGTTCTATACCGCCGTGGCCACCACCGAGATGTCACCGTGGGTAGGGAGAATCCTCTTCATTCTGGAGAGGTTGCTGGTGGTGGTTATGCCTGCTGCGGTTCCCCGGGAATCCATCTTTGTTAATCCAACTTTCTTAATGTATTTCTTGTCTCTTCTCGTTACTGGCGCATATTTCCTCTGCTGGCTCGATCGATTTTTATTCTTTGTTGACAGTAATAACTATTGTTCTGATGAAACCGGTATAAATTCCGCCAAAAGAGAAGAAGAAGAAAGGATCATGATAATGGAAAAAACCAAGAAAAAGAGGAGAGGAAGAGGAAGAGGAAGAAAAAGAAGGAGTCTATGTCTAAAACTTGGGAAGCGCTTTGGAATGGCTCTTTATAGAAACAATGGTGAATTGCTCACCGAGAGAAGGGGCATCATTGATGCGGTTGTCAATTCTCTTGGTAAAAGTGACCATGGCTCGCGAATCTTGCGTCGTGGTAGAAGGCTTGGTCGGATTACCAAACACAGACTTTCGCGTTGGCTTCTCCTTCTTACTGCACTCTTTTCAGTTTATTTCACAGTTTGTGGCCTGAAAATGTTTATTCACGCTAAAATGGAATCTAGGTTCCCAGCGACTCACAGTATACGGGAAGGGCTCAACCTACACAGTAAACATGAAGAGCTTAACCTACACAGTATACACAAAGAGCTCAACCTTCAAGAAACTGTTTCATTATCTGAATTTGGAAAACCACCACCTAAAAGCAAGCGCAGGAAGCATTTTCCTTGCGAAGTTGAATTTCTGAAGTCAGTAGATGGCCTTGCTGAACCCAAGAATTACATGAATTTCACTTGGTTTTCTCTAGATTATGTTAAACAAGAAGGAAAAACATCCGATAGTGGTTTGTTTGAACCTCGATTTGGAGGACATCAGACTCTTGAGGAGAGAGAAAAGTCATTTTATGCCAAAAACCAAATGGTTCATTGTGGTTTTGTCAAGGGATCACCAGGGTATTCAAGCACTGGATTTGATTTAGATGAAAAAGATAATGCATACATGTCAAAGTGTAAGATTGCAGTTTCTTCTTGCATTTTTGGAAGCTCCGATTTTCTTCGGAGGCCTACAAGTAGACTGATTAGTCAATATTCAAAGAACAATGTTTGTTTTGTGATGTTCTTGGATGAACAAACACTATCCAAACTTTCATCAGAAGGGAACAGTCCCGATGAAAGAGGGCATATTGGCCTATGGAAAGTAGTAGTTGTGAAAAACTTGCCATATGAAGACATGCGGAGGACTGGCAAGGTGCCAAAATTTTTAGCACACCGCCTCTTCCCAAATTCTAGGTATTCAATTTGGCTTGACAGCAAGATGAGACTCAATGCTGATCCTATGTTGATCATTGAATATTTTTTGTGGCGAAGGAATGCTGAATTTGCCATTTCAAATCATTATGATCGCCACTGTGTCTGGGATGAGGTACTCCAAAACAAACGCTTAAACAAGTACAACCACACGGCAATTGACGAACAGTTTAACTTTTACCAATCTGATGGCCTAACCAAGTTTGATCCTTCAAACCCAAATAATCCTCTTCCAAATGTTCCTGAGGGTTCCTTGATAATAAGGGCACATACACCAATGTCAAATTTATTTTCATGCCTTTGGTTCAATGAAGTTGATCGATTTACTTCTCGAGATCAACTAAGCTTTGCTTATACTTATTTGAAATTGAGGAGAATGAATCCAGAGAGACCATTTCAGTTGTATATGTTCAAGGGATGCACACTGGAAATGAAGTTTATCATAGACTAG 3363 0.4098 MFIPLLCLKVGKRFGMALYRNNGELLTERRGIIDAVVNSLGKSDHGSRILRRGRRLGRITKHKLSRWLLLLTALFSVYFTVCGLKMFIHVYGKGSTYTVNMKSSTYTVYTKSSTFKKLFHYLNLENYHLKASAGSSVDGLAEPKNYMNFTWFSLDYVKQEGKTSDSGLFEPRFGGHQTLEEREKSFYAKNQMVHCGFVKGSPGYSSTGFDLDEKDKAYMSKCKIAVSSCIFGSSDFLRRPTSRLISQYSKNNVCFVMFLDEQTLSKLSSEGNSPDERGHIGLWKVVVVKNLPYEDMRRTGKVPKFLAHRLFPNSRYSIWLDSKMRLNADPMNAEFAISNHYDRHCVWDEVLQNKRLNKYNHTAIDEQFNFYQSDGLTKFDPSNPNNPLPNVPEGSLIIRAHTPMSNLFSCLWFNEVDRFTSRDQLSFAYTYLKLRRMNPERPFQMANRMTEKERSNVEFKALLMERIALVFIAIVTASIWWPCAAHNVATCPSTDDPHTWSFISLVLFTYTIMPAFYVFRWFYTAVATTEMSPWVGRILFILERLLVVVMPAAVPRESIFVNPTFLMYFLSLLVTGAYFLCWLDRFLFFVDSNNYCSDETGINSAKREEEERIMIMEKTKKKRRGRGRGRKRRSLCLKLGKRFGMALYRNNGELLTERRGIIDAVVNSLGKSDHGSRILRRGRRLGRITKHRLSRWLLLLTALFSVYFTVCGLKMFIHAKMESRFPATHSIREGLNLHSKHEELNLHSIHKELNLQETVSLSEFGKPPPKSKRRKHFPCEVEFLKSVDGLAEPKNYMNFTWFSLDYVKQEGKTSDSGLFEPRFGGHQTLEEREKSFYAKNQMVHCGFVKGSPGYSSTGFDLDEKDNAYMSKCKIAVSSCIFGSSDFLRRPTSRLISQYSKNNVCFVMFLDEQTLSKLSSEGNSPDERGHIGLWKVVVVKNLPYEDMRRTGKVPKFLAHRLFPNSRYSIWLDSKMRLNADPMLIIEYFLWRRNAEFAISNHYDRHCVWDEVLQNKRLNKYNHTAIDEQFNFYQSDGLTKFDPSNPNNPLPNVPEGSLIIRAHTPMSNLFSCLWFNEVDRFTSRDQLSFAYTYLKLRRMNPERPFQLYMFKGCTLEMKFIID* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4829 1120 Pfam Protein of unknown function (DUF616) 804 1114 IPR006852 -
Amo13g4829 1120 Pfam Protein of unknown function (DUF616) 154 445 IPR006852 -
Amo13g4829 1120 PANTHER BNAA02G26630D PROTEIN 656 1112 - -
Amo13g4829 1120 PANTHER ALKALINE CERAMIDASE-RELATED 656 1112 IPR006852 -
Amo13g4829 1120 PANTHER BNAA02G26630D PROTEIN 27 446 - -
Amo13g4829 1120 PANTHER ALKALINE CERAMIDASE-RELATED 27 446 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4829 Amo-Chr13 146730519 146743918 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4829 - - gmx:100807624 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4829 13 146730519 146743918 Amo13g4829 13 146730519 146743918 ECH