Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4820 ATGTTGGACGGCCGTTCCTGTGTGGTTCCGAGGTTGTTTCCCAGCTCCTACCAGGCAGAAAACAAGTGGCCTTTCATGACATATCTGCCTGACTTGGACATCAAGAACGGCAAGCGCCCTTTGGAAAATGATGTCAATGATGAACCCAATCCCAGGAAGGTTAATAGCAAGAGATTGGGTTCTCGCCACCTCCGAGGTGAAGCCAATCGAGTTTTGTTCCAACAGCAGCCTTATCAGATTGAGGATTCTGTTGTTCCAAAAATTGATGAGGACGTTGATGATGGTGTTGATAGTGATGATGATGACTCTACCATGCAGGATCACAGGAATGATTTTGTGCTGCTGAGTGGTCTCCAAATAGATGAAGATGCTCTAGCTCATTCTCCTGAGCTGTTAGCTGAACATGACAAGTATCAAGCCAGGGATTCATTGGAGTCCGGTTTCCATCAATCTGATAAGCAGCAGGAGAATCAATCCAAGCATTTTTCTGATTCTGGAGTTCAGCAATCTGACGAGATGCAGCTGCTTGCTGCAAATTTGTCGAATTCCAGTGACCAGCCATCTGATCAGCAGCAAGAGAATCATTCCGGTGATTCATCGGATTCTGGTTCCCTTCTGCCTCGAATGAATAGAGACAGCTCGATTGCCTGTCTCAGCCGCTGTTCGAGGTCCGATTATGGTTCTCTTGCATCACTGAACTCAAGCTTTCGCAACATTATTCGAAGTGGTGAGCTATACAAGTGGAGGAGACTGAATGGAATCATAGAACACTGGGTTTACTTTTCCTGTGCCCTCCTTGAATGGGAGGCCTATGATCCCATTCGCGAAAGGTGGATGCATTTGCCTAGGATGGCTTCTAACGAATGCTTCATGTGTTCAGACAAGGAGTCCTTGGCTGTTGGTACTGAACTACTTGTGTTTGGGAGGGAGCTGAGATCCCATGTCATTTACAGATACAGTCTTTTGACGAATTCATGGTCTTCGGGAATGCGGATGAATGCTCCAAGATGCTTGTTTGGATCTGCTAGCCTTGGAGAGATTGCAATTTTGGCCGGTGGGTGTGATTCCGAGGGACGTATTCTGGACTCTGCTGAACTGTATAATTCCGAGAATCAACAATGGGAAATGCTCCCACCCATGAAAAAGCCTAGGAAGATGTGCTCTGGAGTATTCATGGATGGAAAGTTCTATGTGATCGGTGGAATTGGTGGAAGCGAGTCTAAGCTTCTTACCTGTGGTGAGGAGTACAATCTACAGACTAGGACATGGACAGAAATTCCTAGCATGTCCCCAGGACGCAATGCTAGGGGGGCCGAGATGCCTGCAACAGCCGAGGCGCCACCTCTGGTTGCTGTTGTAAATAATGAATTATATGCTGCTGATTATGCTGACATGGAGGTTAAGAAGTACGATAAAGAGAGAAAAGTGTGGAATACCATTGGGAGACTTCCGGAGCGAGCAGTGTCAATGAATGGCTGGGGTCTTGCATTCAGGGCATGCGGAAATCGGCTAATCGTGATAGGTGGACCTCGGACACAAGGTGGGGGTTTTATTGAACTCAACTCGTGGGTGCCGAGCGAAGGACCTCCCCAATGGAACCTACTGGCCAGGAAACGGTCTGGTAACTTTGTCTATAACTGTGCCGTGATGGGATGTTGA 1659 0.4756 MLDGRSCVVPRLFPSSYQAENKWPFMTYLPDLDIKNGKRPLENDVNDEPNPRKVNSKRLGSRHLRGEANRVLFQQQPYQIEDSVVPKIDEDVDDGVDSDDDDSTMQDHRNDFVLLSGLQIDEDALAHSPELLAEHDKYQARDSLESGFHQSDKQQENQSKHFSDSGVQQSDEMQLLAANLSNSSDQPSDQQQENHSGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNSSFRNIIRSGELYKWRRLNGIIEHWVYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSENQQWEMLPPMKKPRKMCSGVFMDGKFYVIGGIGGSESKLLTCGEEYNLQTRTWTEIPSMSPGRNARGAEMPATAEAPPLVAVVNNELYAADYADMEVKKYDKERKVWNTIGRLPERAVSMNGWGLAFRACGNRLIVIGGPRTQGGGFIELNSWVPSEGPPQWNLLARKRSGNFVYNCAVMGC* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4820 552 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 552 - -
Amo13g4820 552 MobiDBLite consensus disorder prediction 181 207 - -
Amo13g4820 552 MobiDBLite consensus disorder prediction 86 107 - -
Amo13g4820 552 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 552 - -
Amo13g4820 552 Pfam Kelch motif 383 430 IPR006652 GO:0005515
Amo13g4820 552 Pfam Kelch motif 335 380 IPR006652 GO:0005515
Amo13g4820 552 Gene3D - 259 538 IPR015915 GO:0005515
Amo13g4820 552 SUPERFAMILY Kelch motif 265 549 IPR015915 GO:0005515
Amo13g4820 552 MobiDBLite consensus disorder prediction 147 168 - -
Amo13g4820 552 SMART kelc_smart 395 443 IPR006652 GO:0005515
Amo13g4820 552 SMART kelc_smart 303 346 IPR006652 GO:0005515
Amo13g4820 552 SMART kelc_smart 347 394 IPR006652 GO:0005515
Amo13g4820 552 MobiDBLite consensus disorder prediction 38 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4820 Amo-Chr13 146567120 146571213 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4820 - - gmx:100791897 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4820 13 146567120 146571213 Amo13g4820 13 146567120 146571213 ECH