Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4800 ATGAGCATGTCCACAACCCTCACTTTGGAACCACTCTTCGGCTTCAACACACGCAGAGGCATCCCCATTTCCATTATTCACCGCTCTTCCAAGCCCAAGACATTGTTGTTCCCTCCACCTTCTTCTCTCTCTTCTTCCACCATCATCAAGAGTTCCTCTTGGTCTTGGTCGGTATCCCACAGGCTCCACGCTCCAAAGTTTGAAGCTTTTGCCGCGAACACTGATACCCTCGAGCCCCTTCAATCATCTGATGTATTATTCAGCAAGATTTTCCCCATCAACAGAACTGAATTGTTGGAGGGACAAATCTTTGTTAGATTGGATCAGGGCAAAGACTTAAGAAATTGGGAGCTAACTGTGGGTTGCAATCTACCTGGGAAATGGGTTCTTCACTGGGGAGTTTCCCGCTTAGATGATGTTGGAAGTGAATGGGATCAGCCTCCTCGTGATATGATACCCCCAGGATCTGTTCCTATAAAGGACTATGCAATTGAGACACATTTGAAGAAATCAACGTCATCTTCTGAAGGAGATAATTTTCATGAGGTCAAGATTGATCTTACATCCAACAGTGAAATCTCCGCAATTAATTTTGTTCTCAAGGATGAGGAAACTGGTGCTTGGTTTCAACACAAAGGAAGAGATTTCAAGGTTCCTCTAGTCAGCTACCTGAAGGAGGATGCTAATATAATTGGACCTAAAAAGGGCTTTAGTTTTTGGCCAGGGGCCTTGGGGCAGATATCTAACATTCTTCTCAAGTCAGAGGCAGTGCATAGCAACGATCAAGATAACGGCAAGCAATCCAGTGAGCCAAGAAAAGGAAATAGTCAACTAGAAGGCTTCTATGTAGAGCTGCCAATTACCAAAGAAGTTACTGTCGGCAACTCTATCAGTGTCTCCGTTAAGAAATGTGCTGAGACAGCTAACAATCTTTTATATTTAGAAACAGATATACCTGGAGAGGTTCTCCTTCATTGGGGAGTTTGCAAAGATGATTTGAGAAGGTGGGAAGTTCCACCTGCTCCTCATCCAGCAGAAACAGTAGCATTTAAGAACAGAGCTTTGAGAACTAAATTACAGTCAAGGGACAGCGGGAAGGGGAATTCAGTAGAAATTCCTGTGGGAGAAGAATTTTCGGGATTTCTTTTTGTTGTTAAGCTAGACGACAATAATTGGTTGAATGACAAGGGAAATGACTTTCATATCCCTCTGTCAAGTTCTAGTAACTCACTTACTAGCAAAAGAAAGGATCAATCAGAAGCTGTCCAGAGGGAAGTGACAAAAGTGGAAAGTCAGAAGGAATCTACCTCTACGTTTACCGATGGAATAATCAGTGAAATAAGGCATTTAGTGACAGACATTTCCTCTGAGAAGACTCGAAAAACAAAATCCAAAGAAGCACAAGAAAGCATTCTTCAAGAAATTGAAAGACTTGCTGCTGAAGCTTATAGTATTTTTAGGACCAATGTTCCAACTTTCTCAGAGGAAACCATTGCGGAACCTGAGGCGGTGGCTTCTGTAGAATCAGAGACATTGGTGTCACCTGAGGCACCAAAAATATCCTCAGGGACAGGCACTGGTTATGAAATATTATGCCAAGGGTTTAACTGGGAATCTCATAAATCTGGAAGATGGTACATGGAGCTGAAAGAGAAAGCTGCAGAACTATCATCATTTGGTTTTACTGTAGTTTGGTTACCACCACCTACGGAGTCTGTGTCCCCTGAAGGATACATGCCAAAGGATTTATATAATTTAAATTCTAGATATGGAAACATTGATGAACTGAAGGATGTGGTGAAAAGCTTTCACAGAGCTGGAATCAAAGTACTTGGAGATGTCGTTTTGAATCATCGATGTGCCCACTTTAAGAACCAGAATGGTATTTGGAACATATTTGGAGGTCGCCTCAACTGGGACGATCGAGCAATTGTTGCTGATGATCCACATTTTCAGGGTAGAGGCAACAAAAGTAGTGGAGATAATTTCCATGCTGCTCCGAACATTGATCATTCACAGGAATTTGTGAGAAAGGATATTAAAGAATGGTTACTTTGGTTGAGGTTAATATTACTGATCTTAATTTTCAATAGCTTATTACTAGTGCTTAGGACATAA 2118 0.4169 MSMSTTLTLEPLFGFNTRRGIPISIIHRSSKPKTLLFPPPSSLSSSTIIKSSSWSWSVSHRLHAPKFEAFAANTDTLEPLQSSDVLFSKIFPINRTELLEGQIFVRLDQGKDLRNWELTVGCNLPGKWVLHWGVSRLDDVGSEWDQPPRDMIPPGSVPIKDYAIETHLKKSTSSSEGDNFHEVKIDLTSNSEISAINFVLKDEETGAWFQHKGRDFKVPLVSYLKEDANIIGPKKGFSFWPGALGQISNILLKSEAVHSNDQDNGKQSSEPRKGNSQLEGFYVELPITKEVTVGNSISVSVKKCAETANNLLYLETDIPGEVLLHWGVCKDDLRRWEVPPAPHPAETVAFKNRALRTKLQSRDSGKGNSVEIPVGEEFSGFLFVVKLDDNNWLNDKGNDFHIPLSSSSNSLTSKRKDQSEAVQREVTKVESQKESTSTFTDGIISEIRHLVTDISSEKTRKTKSKEAQESILQEIERLAAEAYSIFRTNVPTFSEETIAEPEAVASVESETLVSPEAPKISSGTGTGYEILCQGFNWESHKSGRWYMELKEKAAELSSFGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGNIDELKDVVKSFHRAGIKVLGDVVLNHRCAHFKNQNGIWNIFGGRLNWDDRAIVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDIKEWLLWLRLILLILIFNSLLLVLRT* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4800 705 Pfam Alpha amylase, catalytic domain 556 623 IPR006047 GO:0005975
Amo13g4800 705 SUPERFAMILY (Trans)glycosidases 528 687 IPR017853 -
Amo13g4800 705 Gene3D Glycosidases 529 691 - -
Amo13g4800 705 MobiDBLite consensus disorder prediction 417 431 - -
Amo13g4800 705 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 87 688 - -
Amo13g4800 705 PANTHER ALPHA-AMYLASE 87 688 - -
Amo13g4800 705 MobiDBLite consensus disorder prediction 404 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4800 Amo-Chr13 146246474 146251996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4800 18 687 Glycoside Hydrolase AT1G69830 59.077 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4800 K01176 - gmx:100788193 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4800 13 146246474 146251996 Amo13g4800 13 146246474 146251996 ECH