Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4797 ATGGTGAATGGTCCAGGTCTCTACTCCGATATCGGAAAGAAAGCTCGAGAGCTTCTGTTCAAGGATTATCAGAACGACCACAAGTTCACTATCACCACTTACACTTCCACTGGAGTGGAAATCACTTCAACTGGAATCAGGAAGGGTGAGATATATTTGGCAGATGTCAACACTAAGCTGAAGAACAAGAACATCACAACCGATATTAAAGTTGACTCGAATTCAAATCTACTTACTACTGTTACCGTGGATGAACCTGCACCTGGACTCAAATCCATTTTTAGCTTCATTTTCCCAGATCAGAAATCTGGCAAGGTTGAACTCCAGTACCGGCACGAGTATGCTGGAATAAGCACCAGCCTTGGATTGACAGCAACTCCCATTGTTAACTTTTCTGGTGTGGTTGGAAATGATTTGGTTGCTGTTGGGACTGATCTTTCATTCGATACTGCCTCTGGAAACTTCATCAAATATAATGCAGGGCTAAACTTCACTCATGCTGACCTTATTGCATCCCTAACCGTAAATGATAAGGGTGACACCGTCAATGCATCATACTATCATGTTGTAAGCCCGTTGACAAACACTGCTGTTGGTGCCGAGCTTTCTCACAGCTTTTCTAGCAATGAAAACATGCTGACTATTGGCACACAGCATGCACTTGACCCCCTAACATTGGTGAAAGCTCGGGTGAACAACTATGGCAGGGCCAATGCTGTGATCCAGCATGATTGGAATCCAAGAACCCGGGTCTCTCTCTCGGGTGAAGTGGATACCGGGGCAATTGAGAAGAGTGCAAAGGTTGGTCTTGCCGTGGCCTTGAAGCCTTAG 831 0.4525 MVNGPGLYSDIGKKARELLFKDYQNDHKFTITTYTSTGVEITSTGIRKGEIYLADVNTKLKNKNITTDIKVDSNSNLLTTVTVDEPAPGLKSIFSFIFPDQKSGKVELQYRHEYAGISTSLGLTATPIVNFSGVVGNDLVAVGTDLSFDTASGNFIKYNAGLNFTHADLIASLTVNDKGDTVNASYYHVVSPLTNTAVGAELSHSFSSNENMLTIGTQHALDPLTLVKARVNNYGRANAVIQHDWNPRTRVSLSGEVDTGAIEKSAKVGLAVALKP* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4797 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Amo13g4797 276 Gene3D Porin 1 275 IPR023614 -
Amo13g4797 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Amo13g4797 276 PANTHER MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 3 1 276 - -
Amo13g4797 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
Amo13g4797 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4797 Amo-Chr13 146205559 146208331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4797 K15040 - gmx:100787662 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4797 13 146205559 146208331 Amo13g4797 13 146205559 146208331 ECH