Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4786 ATGGGTTGCCGGTTTTGTTTATGTCGATTATTGTGTTTGTTTCTGGAGCTAGGGTTTATGCATTTGTTAAACATTGGAAACTCTTTGCTTTATCTGAAACCAATCAGGTCAAAATCGTCATTGCAAGAGAAATTGCTAGACGAAGAAAGACAGATGGCAAAGAAGCCTGGATGGAAAGCAATGCCTTATATCTTAGGGAATGACACTGTGGAAAGGTTGGCAACATTTGGAATGCAAGCAAACCTGACAATGTATTTGATGAAAGTTTATAACATGGATCAAGTGTTTGCTGCAAACATCATTAACAATTGGTATGCCATCACCAATGTTCTTCCAGTCCTTGGTGGCTTTCTTGCTGATGCCTATTTAGGAAAATTCCCAACAATCGCCATTGCATCCTTTGCCAGTCTTACGGGCATGGTGGTAGTAATGCTAACAACATGGGTGCCACACATTCATCCAACAACATGCACTCTCCAACAACAACTCGATGGTGTTTGCAAAGGGCACACAACATTGCAACTAACCGTCCTACTCATAGGCCTATTCCTCCTGTCGATAGGAACAGGAGGAATCAGGCCTTGCAGCATTCCGTTCGCCATCGACCAATTCGACTTGACAACGGTCGATGGACGGCGCGGAACGACACGGTTCTTTAATGTGTATTACACCACACAAACATTGATCATGCTGATGAACCAGACTCTGTTGGTTTACATCATGGATTCTGTTAGTTGGACTCTTGGTTATGGTTTGCCAGTTATGTTTATGTTGGTTTCCATTTTTGTTTTCTTTGCGGGGACTAGGGTTTATGATTTTGTTAAGCCACAGGGAAGTATATTCTCTAAGATTGCTCAGGTGGTGGTTGCGGCGGTGCACAAGCGCCACCTTTCTTTGCCTCCTAATTTGGAAACTCAGGAAGCTTTTTATGATCGTCCGCTTCAGAACGATGGAGAACCAAACCTACCTCTTACATATAACTTCAGGTGGCTAAACAAGGCTGCTCTTATTGGTGGAGATGAAATGAACATGGATGAATCAAGAAGAGATCCATGGAGACTATGCAGCATCCAACAAGTAGAAGAGCTGAAATGCTTGCTCAAAATGATACCAATATGGATATCCACCATCATAATCTTCCTTCCAGTGGTACAACAATCAATATTCCCAGTCTCACAAGCCCTCAAAATGGACAGGCACCTATCACACAACTTTGAAATGCACCCTGCCTCAGTATCCGTCATAACAATGCTAACAATCGGCGTATGCCTCCCTATCTATGACCAACTCCTCGCGCCGGCCCTCGAGAAACTCACTAAACAAGAAGGAGGCCTCACGGTCCTCCAGAGAGTCTCGCTGGGACACGGCGCGGGGATATTGGCCATGATAGTAGCCGGATTTGTAGAAATCCGGAGGAGGCGTCTCGCGATAGCCCTAGACGCGCCGGACGGGGTTGCACCAATGTCAGTCCTGTGGCTTGCACCTCAATCAATGCTAATTGGATGCATTCATGTGTTCGGAGAAGTTGGCAACACTACATTTTTCAATAGAGAATCACCTGAGGGAATGAGAAGCATAAGCAACTCTTTGCTTTGTCTAAATTTGTCATTTACTAGTAACCTTAGCAATGTTATAATAAATGTTGTGCATAACTTCACTGGCAAGAAAGGAGGTCAACATGGTTGGCTTTATAGTGATATTAATAAGGGTAGGGTTCATGATGTTGAATATGTGCTATTTCATCTTCTGTGCTCGTCGCTATACTTACAAAGTTACAAGGCATTCACATGTGAGAATGTTCAATATGCGGCACAAATAAAAAAAGTTGCAACAATGATTGAAAAAATATCTTCTTCAGAATCTTCTTCAGCTACCAAAACCAACAAGAAATATGGAGGCTGGAAGGCTGTACCTTTTATTTTAGGGAATGAAACGTTTGAGAGGTTGGCAGTGTTTGGGTTACTTCTGAACTTTATGGTGTATCTAACAACACAGCTTCATCTAAACCAAGTCAGCGCTTCAAATGGAATGGTGTTGGTGTTTTTAACATCATGGTTACCAGAATTGCACCCTCCAAGTTGCACAGCTCAAGAACTGGCAAAAGGTGAATGTGTTAAAGCAAGCAATTCTCAAATGGGTGTTGTGATCTTAGGACTTTGCTTCTTGACAATAGGTTCGGCCGGAATAAGGCCGTGTAGCATACCGTTCGGCGTCGACCAATTCGACCAGACAACGGAAGAAGGGAAGAAAGGCATGGCCAGCTACTTCAATTGGTACTACACAACATTCACATTGGTCTTGTTGGTGTCTCAAACACTTGTTATCTATGTCCAAACCTCTATTAGCTGGAAAATAGGTTTTGCAATACCAACTGTGTGCATGTTTTTGTCCATAATCATGTTGTTTGTTGGAACAAGGCTTTATGTGTATGTGAAGCCTGAAGGGAGCACTTTTCCTGGAAGTGGACATGTTCTTGTTGCTGCTTATAGGAAAAGAAAACTCATGCTTCCAATTATTGAAGACAAACTTGATGGTGTTTTCTATGATCCCCCATTGATCTCTGCTAGTAGTGGTGATTCTTTGCCATTAAAGCTCCCTTTAACCCAACAGTTTAGGGCCTTGAACAAAGCTGCTCTAATAATGGAGGGGGATCTAAACGAAGATAAGAGCATAGTGAATAAGTGGAGACTTACAAGCATTCAGCAAGTAGAAGAGGTTAAATGCATAGCAAGAGTTTTACCAATCTTATTCACTAGTATCATTCCTCTCATTGCCCTGTTACAACAAGGAACATTCAATGTATCACAAGCCCTGAAAATGGACAGAAACCTAGGACCTAAATTCCAAGTCCCAGCAGGTTCAATTGGAGTCATATCATACATTACCATAGCTTTGTGGCTCCCATTCTATGACCGGATCCTAGTACCAAGGCTAAGAAAAATGACCAACCAAGAAGGTGGCATCACCCTACTACTAAGAATTGGAATTGGCAATGTCTTCTCTATTTTCTCTATGGTTGTTGCTGGTTTGGTTGAAAAATTGAGAAGGGATTCAGCAAATTCACATCAAAATCCACTAGGAATTGCTCCTATTTCAGTTTTTTACCTAGCACCACAATTGGTCCTAATGGGTATGTGTGAAGCCTTTAGTGCAATAGGGCTAATTGAGATTTTTAATAGAGAGTTTCCTGAGAATATGAGAAGTGTTGGCAATTCATTGTTTCCATTTGCTTTTGGATGTGCTAGCTATGTGAGTGCTATAATTGTTAACATTGTTCATCATGTTACTGGAACACATAGCCATCCAGATTGGTTAACAAATGACATAAATGCTGGACTAGGCGTTATAAACTTGGTTTATTTTATACATGTTGCTACAAGGTATCAATACAAAAAGATCCAGGTTATTGATCCATTGCCACAAGACATGGAGATGGGATCACACAAAACCTAG 3453 0.4173 MGCRFCLCRLLCLFLELGFMHLLNIGNSLLYLKPIRSKSSLQEKLLDEERQMAKKPGWKAMPYILGNDTVERLATFGMQANLTMYLMKVYNMDQVFAANIINNWYAITNVLPVLGGFLADAYLGKFPTIAIASFASLTGMVVVMLTTWVPHIHPTTCTLQQQLDGVCKGHTTLQLTVLLIGLFLLSIGTGGIRPCSIPFAIDQFDLTTVDGRRGTTRFFNVYYTTQTLIMLMNQTLLVYIMDSVSWTLGYGLPVMFMLVSIFVFFAGTRVYDFVKPQGSIFSKIAQVVVAAVHKRHLSLPPNLETQEAFYDRPLQNDGEPNLPLTYNFRWLNKAALIGGDEMNMDESRRDPWRLCSIQQVEELKCLLKMIPIWISTIIIFLPVVQQSIFPVSQALKMDRHLSHNFEMHPASVSVITMLTIGVCLPIYDQLLAPALEKLTKQEGGLTVLQRVSLGHGAGILAMIVAGFVEIRRRRLAIALDAPDGVAPMSVLWLAPQSMLIGCIHVFGEVGNTTFFNRESPEGMRSISNSLLCLNLSFTSNLSNVIINVVHNFTGKKGGQHGWLYSDINKGRVHDVEYVLFHLLCSSLYLQSYKAFTCENVQYAAQIKKVATMIEKISSSESSSATKTNKKYGGWKAVPFILGNETFERLAVFGLLLNFMVYLTTQLHLNQVSASNGMVLVFLTSWLPELHPPSCTAQELAKGECVKASNSQMGVVILGLCFLTIGSAGIRPCSIPFGVDQFDQTTEEGKKGMASYFNWYYTTFTLVLLVSQTLVIYVQTSISWKIGFAIPTVCMFLSIIMLFVGTRLYVYVKPEGSTFPGSGHVLVAAYRKRKLMLPIIEDKLDGVFYDPPLISASSGDSLPLKLPLTQQFRALNKAALIMEGDLNEDKSIVNKWRLTSIQQVEEVKCIARVLPILFTSIIPLIALLQQGTFNVSQALKMDRNLGPKFQVPAGSIGVISYITIALWLPFYDRILVPRLRKMTNQEGGITLLLRIGIGNVFSIFSMVVAGLVEKLRRDSANSHQNPLGIAPISVFYLAPQLVLMGMCEAFSAIGLIEIFNREFPENMRSVGNSLFPFAFGCASYVSAIIVNIVHHVTGTHSHPDWLTNDINAGLGVINLVYFIHVATRYQYKKIQVIDPLPQDMEMGSHKT* 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4786 1150 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 45 602 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo13g4786 1150 SUPERFAMILY MFS general substrate transporter 50 554 IPR036259 -
Amo13g4786 1150 PANTHER PEPTIDE/NITRATE TRANSPORTER 675 1133 - -
Amo13g4786 1150 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 675 1133 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo13g4786 1150 Gene3D MFS general substrate transporter like domains 608 1137 IPR036259 -
Amo13g4786 1150 SUPERFAMILY MFS general substrate transporter 711 1116 IPR036259 -
Amo13g4786 1150 Pfam POT family 127 563 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo13g4786 1150 Pfam POT family 676 1098 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo13g4786 1150 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 621 676 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo13g4786 1150 PANTHER PEPTIDE/NITRATE TRANSPORTER 45 602 - -
Amo13g4786 1150 PANTHER PEPTIDE/NITRATE TRANSPORTER 621 676 - -
Amo13g4786 1150 Gene3D MFS general substrate transporter like domains 36 600 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4786 Amo-Chr13 145987109 146007594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4786 45 630 Organic Solute Cotransporters AT1G69870 42.833 4.93e-164 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4786 - - gmx:100809657 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4786 13 145987109 146007594 Amo13g4786 13 145987109 146007594 ECH