Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4785 ATGGATCCTTCATCTTCCATGTCGCTTCCACCTTCTATGCACCTCGCAATGGCGGCTCTGCTCGGAGCCTCCTTCATGGCCATCTCCGCCTTCTACATCCACCGCCGCACCGTTGACCACGTCCTCCACCGCCTCGTCGAGGTCCGCCGCGGGCCACCTCGTACTTCCTCTAGCGGCGCCGTCGATGCCGACACCGACGACTACGATGACTTCGAAGAAGAAGAATACGAAGACGGCGACGATCGGAGCGGCTTCGGCGGAGAATTCGACGCTGATTCGACACACTATCAGGGAAGCCTGACAAGGTCCGTGGACGAAAGCTTGCTTCGGAGCTATAGGATTTCGTCTTCTATGCCGAACGTGGCTTCTGCGGCGGATTGGTTCCCGGAGGACCCTAGGTTCGGGAACACTGCGCAGAACCGTGTCTCGTCGCTTGATAATCTCAAGTTTGCGCCGCTAGGGCTTCCTTCTCTTCGAACGCGATCCACCACCGGAGAGAATGCTCAGCTTTCGAGTTCTTATAAGAGAATAGCATCTGTTGGTAGAATCATGACCCCGAGGTCGCCGGGGCGAACTGCTTTTGAAAGTACTGAAGATTCTGACGAGGAGGGAACACAGCTTGGTGATGACAGTCGCATTCCTTTTTACCCTGGGACTAGAGATTCTTCGAATAATTATGGACTGAATCCAAACATGTGCAATTTATCCGGTGTTGCTTTCAGGCTCGATGATGCAAACTCTGCACACCAGATGTCTGGAGAGGTTTCAAAAGAAGGGAAAGCAAGTGGCGATATGAATACTGATGGAACAGTGGATTCAAATTCAGCACATGCTGCTGAAAAAGACCTTGCTTTTATCAGTAGTGTTTTCCCTAAAAGAAACACAGTGAACGAGCCAATAAACATAGAAGAAGAGGAAGTGTGCAAGATGATTAGAGAGTGCTTAGATTTGCGTAAGCAATATGTTTACAAGGAAAACCTTCCATGGAAGGCTGAACCTGTGGAGGCTGACTCTGACCCATTTCATTTTGAACCAGTTGAAGCAACACCACATCATTTTAGAATGGAAGATGGAGTCATACATGTCTATGCAAATAAAACTGACACTGAAGAGCTCTTCCCTGTTGCAAGCTCAACAACATTTTTTACAGATATGCATTACATTCTTAAAGTTATGTCTGTTGGGAATGTTCGCTCTGCATGCTATCATAGGCTTCGGTTTCTGGAGGAAAAATTCCGCCTTCATCTATTACTAAATGCAGATAGGGAGTTTCTAGCCCAGAAAGGTGCACCACATCGAGATTTTTACAACATCCGAAAAGTTGATACTCACATTCACCATTCGGCTTGCATGAATCAGAAGCATCTCCTCCGCTTCATTAAGTCAAAACTAAGAAAAGAACCTGATGAGGTTGTTATATTTAGAGATGGAAAGTATATGACACTTAAGGAGGTTTTTGAGAGTTTGGATTTAACTGGGTATGATCTGAATGTCGATTTGTTGGACGTCCATGCAGATAAGAGTACATTTCATAGATTTGACAAATTCAACCTCAAGTACAATCCTTGCGGGCAAAGCAGACTCAGAGAGATATTTTTAAAGCAGGATAATCTTATCCAGGGAAGGTTTCTGGCTGAAGTAACAAAGCAAGTTTTAACTGATCTTGAAGCTAGCAAATATCAGATGGCTGAGTACAGGATCTCTGTTTATGGAAGAAAACAGAGTGAATGGGACCAGCTAGCAAGTTGGTTTGTTAACAATGCTATTTATAACAAGAATGCTGTATGGCTAATCCAGTTACCACGACTATACAACGTATACAAGAATATGGGAATTGTTACCTCCTTCCAGAATATTTTGGATAATGTGTTTATTCCTCTATTTGAAGTCACAATTGATCCAAACTCTCATCCTCAATTACATTTGTTTTTGAAGCAGGTGGTTGGATTTGACCTTGTAGATGATGAAAGTAAACCTGAAAGGCGTCCAACTAAGCACATGCCTACACCAGCAGAGTGGACAAATGAATTCAATCCAGCATACTCTTACTATCTTTATTACTGTTATGCAAACCTGTACACCCTCAACAAGCTCCGTGAATCTAAAGGAATGACCACTATTAAGTTGCGGCCCCATTGCGGAGAGGCAGGCGATAGTGATCATTTGGCTGCTGCTTTCCTCCTATGCCATAATATTTCCCATGGGATTAATCTACGGAAAACTCCTGTGTTGCAATATTTATATTACCTTGCACAGGTTGGATTGGCAATGTCACCACTTAGCAATAATTCACTTTTCTTGGACTATTCTCGCAATCCATTGCCCATGTTTTTCCAGCGAGGTCTGAATGTCTCTCTTTCTACTGATGATCCTTTGCAAATTCATTTGACAAAAGAGCCCTTGCTTGAGGAATATAGCGTCGCAGCAAAGGTATGGAAACTCTCTGCGTGTGATATGTGCGAAATTGCCAGAAATTCTGTCTACCAGTCTGGATTTTCACATCAGACCAAGTTACGTTGGCTTGGGGACAAGTATTTCCGTAGAGGTCCGGAAGGAAATGATATTCACAAGACAAATGTTCCCAGTTTGAGAATTGCATTCCGATATGAGACATGGAAGGATGAAATGCAATACATATACGCTGGTCAAGCCACCTTTCCTGAAGATGTAGACCCATGA 2679 0.4408 MDPSSSMSLPPSMHLAMAALLGASFMAISAFYIHRRTVDHVLHRLVEVRRGPPRTSSSGAVDADTDDYDDFEEEEYEDGDDRSGFGGEFDADSTHYQGSLTRSVDESLLRSYRISSSMPNVASAADWFPEDPRFGNTAQNRVSSLDNLKFAPLGLPSLRTRSTTGENAQLSSSYKRIASVGRIMTPRSPGRTAFESTEDSDEEGTQLGDDSRIPFYPGTRDSSNNYGLNPNMCNLSGVAFRLDDANSAHQMSGEVSKEGKASGDMNTDGTVDSNSAHAAEKDLAFISSVFPKRNTVNEPINIEEEEVCKMIRECLDLRKQYVYKENLPWKAEPVEADSDPFHFEPVEATPHHFRMEDGVIHVYANKTDTEELFPVASSTTFFTDMHYILKVMSVGNVRSACYHRLRFLEEKFRLHLLLNADREFLAQKGAPHRDFYNIRKVDTHIHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGKYMTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAEVTKQVLTDLEASKYQMAEYRISVYGRKQSEWDQLASWFVNNAIYNKNAVWLIQLPRLYNVYKNMGIVTSFQNILDNVFIPLFEVTIDPNSHPQLHLFLKQVVGFDLVDDESKPERRPTKHMPTPAEWTNEFNPAYSYYLYYCYANLYTLNKLRESKGMTTIKLRPHCGEAGDSDHLAAAFLLCHNISHGINLRKTPVLQYLYYLAQVGLAMSPLSNNSLFLDYSRNPLPMFFQRGLNVSLSTDDPLQIHLTKEPLLEEYSVAAKVWKLSACDMCEIARNSVYQSGFSHQTKLRWLGDKYFRRGPEGNDIHKTNVPSLRIAFRYETWKDEMQYIYAGQATFPEDVDP* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4785 892 Pfam AMP deaminase 325 879 IPR006329 GO:0003876|GO:0032264
Amo13g4785 892 PANTHER AMP DEAMINASE 12 891 - -
Amo13g4785 892 MobiDBLite consensus disorder prediction 63 81 - -
Amo13g4785 892 Gene3D - 451 541 - -
Amo13g4785 892 CDD AMPD 381 876 IPR006329 GO:0003876|GO:0032264
Amo13g4785 892 MobiDBLite consensus disorder prediction 185 224 - -
Amo13g4785 892 SUPERFAMILY Metallo-dependent hydrolases 284 880 IPR032466 -
Amo13g4785 892 Gene3D - 351 875 - -
Amo13g4785 892 PANTHER AMP DEAMINASE 12 891 IPR006329 GO:0003876|GO:0032264
Amo13g4785 892 ProSitePatterns Adenosine and AMP deaminase signature. 785 791 IPR006650 GO:0009168|GO:0019239
Amo13g4785 892 TIGRFAM AMP_deaminase: AMP deaminase 351 879 IPR006329 GO:0003876|GO:0032264
Amo13g4785 892 MobiDBLite consensus disorder prediction 51 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4785 Amo-Chr13 145976874 145984391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4785 K01490 - gmx:100793831 1454.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4785 13 145976874 145984391 Amo13g4785 13 145976874 145984391 ECH