Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4784 ATGGGAGCCAACTATTCAAATTTGGAATATGTTCAAAGAGCACCAAAGCCATTATCATCAGTAGCTACTTCTCGAATCCTCACCTTTCATTCCTCTGCTAAATGGAAGGCTCACTTTGATGCTTCCAAACAAACAAATAAGCTGATGGTGATTGACTTCACGGCAACATGGTGTGGACCTTGCAAATACATGGGCCCAATTTTCAAAGATTTTTCTGCCAAATACACAGAGGTTGAGTTCATTAAACTTGATGTGGATGAGTTAATGGGAGTGGCCCAAGAATTCCAGGTGCAGGCAATGCCAACATTCGTTTTAGTTAAGAAAGGAAAAATTGTTGATAAGGTGGTTGGTGCAAGAAAGGAGGAGTTGCAGAAGCTTATTGAGAAACACAGGAAATGA 399 0.406 MGANYSNLEYVQRAPKPLSSVATSRILTFHSSAKWKAHFDASKQTNKLMVIDFTATWCGPCKYMGPIFKDFSAKYTEVEFIKLDVDELMGVAQEFQVQAMPTFVLVKKGKIVDKVVGARKEELQKLIEKHRK* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4784 132 Pfam Thioredoxin 37 128 IPR013766 -
Amo13g4784 132 PRINTS Thioredoxin family signature 49 57 - -
Amo13g4784 132 PRINTS Thioredoxin family signature 57 66 - -
Amo13g4784 132 PRINTS Thioredoxin family signature 96 107 - -
Amo13g4784 132 SUPERFAMILY Thioredoxin-like 24 130 IPR036249 -
Amo13g4784 132 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Amo13g4784 132 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
Amo13g4784 132 PANTHER THIOREDOXIN 1 132 - -
Amo13g4784 132 Gene3D Glutaredoxin 7 132 - -
Amo13g4784 132 PANTHER THIOREDOXIN 1 132 - -
Amo13g4784 132 TIGRFAM thioredoxin: thioredoxin 40 130 IPR005746 GO:0015035
Amo13g4784 132 CDD TRX_family 37 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4784 Amo-Chr13 145971016 145972094 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4784 K03671 - gmx:100817994 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4784 13 145971016 145972094 Amo13g4784 13 145971016 145972094 ECH