Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4741 ATGGAGTACTTCAACAAAGCCAAATCCGTGAAGCTTCGGAGCCACCTCGGCAAGTACCTAATCGCAGACGAGGACGGCGAAGGTCTCTACCAGAGCAGAAAAAGCTCGGCGAAGAACGCAATATGGGAGGTGGAGTTAGTAGAAGGGAAGAGCCACAGCATTCGGCTCAAGAGCTGTCACGGTCTGTACCTGAAGGCAACCGACACAGCGTTCCTTCTAGGAATGACCGGAAACCGGGCGGTGCAGTCGGAGATGGACGCAGCAGGTTCGAGTTGGAAGTACGAGTGGGAGCCACGAAGGGAAGGGTTGAGTAACCACGTGAAGCTGAGGAGTTGGTGTGGGACCTACCTTAGGGGAAACGGTGGCACTCCGCCTTGGAGGAATTCAGTTACGCACGACGATCCTCATAGTTCCGCCACTCACTCTTGGATCTTGTGGACTGTGGAGGTTGTTGACAACATTATAGTTGGATCTTTTTCCAAAGAGAGATATGATGATGATGCGGTTGTTTCTGTGGCGGCGCTTTCTGATTCTTATGTAAGATCTCCGTCGTCGTTGCCGCTGTGTGAGGACCCCGCGGAGTTGCAGCTTACGGTGGTGCGCTTCCGCAGCCACCACGACAAGTACCTCACCGCCGACGACGATGAAGAATCCGTCGTCCAAGACCGCAACGGCGCCACCAAGAGCGCCAAGTGGCTCGTCGAAATAGTTCCCGAATACGACAACATCGTACGCCTCAAAAGCTGCTACAACAAGTACCTCACGGCATCAAACCAGCCCTTCCTCCTCGGCGTCACCGGCCGGAAGGTCCTCCAAACTCACCCCTCAAGACTTGACTCCTCCGTCGAATGGGAACCCATCAGAGACGGCGCCCAGGTCAAGCTCAAGACCCGTTACGGCAACTTCTTGCGGGCCAACGGTGGCTTACCGCCGTGGAGGAACTCCGTTACACATGATATTCCGCATCGGACTTCCACTCAGGATTGGGTCTTGTGGGATGTTGATGTGTTGGAGATTCATTCGTCGGATTCATATGTGGGCTCGCCGCCGAAGATGGAGGGGAGAACTATATACTACCATGTTGCCGAAGATGATGGGGAAGTGGACGATGAGAATGTGCAGGGGTATTCTCTGATCTTCAAAGGGAACGGGGTGGAAGAATTGACAAAGAAGTTCGAGGAGGAGACAGGGTTAGAGGGAGTTATTGTGTGCAGTCGGAGTCCTTTGAATGGGAAGCTTTATCCTCTTCGATTGCAGCTTCCTCCAAACAATGTGATGATGCAGGTTGTTTTGGTTCTTCAATCGTCAAAAGTTGCAAAAGACTTTGAGGCACAAGGTTTACTTTGA 1347 0.5278 MEYFNKAKSVKLRSHLGKYLIADEDGEGLYQSRKSSAKNAIWEVELVEGKSHSIRLKSCHGLYLKATDTAFLLGMTGNRAVQSEMDAAGSSWKYEWEPRREGLSNHVKLRSWCGTYLRGNGGTPPWRNSVTHDDPHSSATHSWILWTVEVVDNIIVGSFSKERYDDDAVVSVAALSDSYVRSPSSLPLCEDPAELQLTVVRFRSHHDKYLTADDDEESVVQDRNGATKSAKWLVEIVPEYDNIVRLKSCYNKYLTASNQPFLLGVTGRKVLQTHPSRLDSSVEWEPIRDGAQVKLKTRYGNFLRANGGLPPWRNSVTHDIPHRTSTQDWVLWDVDVLEIHSSDSYVGSPPKMEGRTIYYHVAEDDGEVDDENVQGYSLIFKGNGVEELTKKFEEETGLEGVIVCSRSPLNGKLYPLRLQLPPNNVMMQVVLVLQSSKVAKDFEAQGLL* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4741 448 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 198 343 - -
Amo13g4741 448 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 342 438 - -
Amo13g4741 448 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 157 - -
Amo13g4741 448 SUPERFAMILY Actin-crosslinking proteins 5 151 IPR008999 -
Amo13g4741 448 Pfam Domain of unknown function (DUF569) 198 332 IPR007679 -
Amo13g4741 448 Pfam Domain of unknown function (DUF569) 1 146 IPR007679 -
Amo13g4741 448 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 1 157 - -
Amo13g4741 448 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 198 343 - -
Amo13g4741 448 PANTHER CROSS-LINKING PROTEIN, PUTATIVE (DUF569)-RELATED 342 438 - -
Amo13g4741 448 Gene3D - 199 318 - -
Amo13g4741 448 Gene3D - 5 151 - -
Amo13g4741 448 SUPERFAMILY Actin-crosslinking proteins 199 336 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4741 Amo-Chr13 145336267 145341726 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4741 - - gmx:100785006 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4741 13 145336267 145341726 Amo13g4741 13 145336267 145341726 ECH