Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4729 ATGGCTCTCTCGCGTTCCGGATCCAATCTCCTGAAACCGATCTCACCTTTCTTCTCCTGCGCCCCATCGATTCTCAGCCGTTCGATCTCTTCCTCCAATGATTCCATCACCGTGGAGACCTCAATCCCCTTCACCGCTCACAACTGCGAACCTCCGTCGCGCTCCGTCACCACCTCCGCCGCCGAGCTCCGCTCTTTCTTCCGCGACATGGCCCTCATGCGCCGAATGGAGATCGCCGCCGACAGCCTCTACAAGGCTAAGCTCATCCGCGGCTTCTGCCACCTTTACGACGGTCAGGAGGCTGTCGCCGTCGGAATGGAGGCCGCCATCACCAGGAAGGATTGCATCATCACCGCGTACCGCGACCACTGCACCTTCCTCAGCCGCGGTGGAAACCTAGTCGAGGTTTTCGCCGAGCTCATGGGACGCCGCGCCGGAATGTCCAACGGCAAGGGCGGATCCATGCACTTTTACCGCAAGGAAGGCGGATTCTACGGCGGCCACGGCATCGTCGGAGCTCAGGTTCCGCTCGGTTGCGGATTGGCGTTCGCACAGAAGTACTCGAAGGATGAGAATGTGACTTTTGCTATGTATGGTGATGGTGCTGCTAATCAGGGACAGTTGTTTGAGGCTCTTAACATTGCTGCGCTTTGGGATTTGCCTGCAATTTTGGTCTGCGAGAATAATCATTATGGAATGGGAACTGCTGAGTGGAGAGCTGCAAAGAGTCCTGCTTATTACAAGCGTGGGGATTATGTTCCCGGATTGAAGGTAGATGGCATGGATGCTTTTGCTGTGAAACAAGCATGCAAATTCGCAAAGGAGCATGCTTTAAAGAATGGACCAATTATTCTTGAAATGGACACATACAGGTATCATGGTCACTCCATGTCTGACCCTGGTAGCACATACCGTACACGTGATGAGATTAGTGGTGTTAGACAGGAGCGTGATCCAATTGAGAGAATAAGAAAGTTGTTGCTGTCTCATGAGATTTCTACTGAGACAGAGCTAAAGGACATCGAGAAGGAGGTCAGAAAAGAAGTTGACAACGCCATTTCAAAAGCAAAGGAGAGTGAGATGCCAGATCCATCTGAACTATTTACTAATGTGTACGTTAAGGGTTTTGGTGTTGAGGCATATGGTGCTGATAGGAAAGAACTTAGAGCTACTCTGCCCTAA 1182 0.5169 MALSRSGSNLLKPISPFFSCAPSILSRSISSSNDSITVETSIPFTAHNCEPPSRSVTTSAAELRSFFRDMALMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAITRKDCIITAYRDHCTFLSRGGNLVEVFAELMGRRAGMSNGKGGSMHFYRKEGGFYGGHGIVGAQVPLGCGLAFAQKYSKDENVTFAMYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDAFAVKQACKFAKEHALKNGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLLLSHEISTETELKDIEKEVRKEVDNAISKAKESEMPDPSELFTNVYVKGFGVEAYGADRKELRATLP* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4729 393 CDD TPP_E1_PDC_ADC_BCADC 66 356 - -
Amo13g4729 393 MobiDBLite consensus disorder prediction 296 315 - -
Amo13g4729 393 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 4 393 - -
Amo13g4729 393 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 62 373 IPR017597 GO:0004739|GO:0006086|GO:0043231
Amo13g4729 393 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA, MITOCHONDRIAL 4 393 - -
Amo13g4729 393 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 53 374 IPR029061 -
Amo13g4729 393 Pfam Dehydrogenase E1 component 69 364 IPR001017 GO:0016624
Amo13g4729 393 Gene3D - 22 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4729 Amo-Chr13 145156773 145161402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4729 1 393 Acyl Lipid Metabolism Gene Families AT1G24180 78.117 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4729 K00161 - gmx:100813933 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4729 13 145156773 145161402 Amo13g4729 13 145156773 145161402 ECH