Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4722 ATGGACTCTCCAAGACACGTTCTGCTCTTCTTTTTCTTCTTCCTTGTTCCCACATGCTTCTCCAATGAATGTTTGTGTTCGAACCAAACCTCTTCTAATTCTTATTATTATTCATCATCATCATCATCATCATCACTGCAAGATGAGATTGTAGAGCTTGCAAACAGGGCAAGCTTGTTGAAGTGGATGAAGAGAATAAGGAGGGAAATCCATGAACACCCTGAGGTTGCATATGAAGAGTTCAACACAAGTGCTCTCATAAGACATGAGCTTGATCAACTTGGTGTCTCTTACCAGTGGCCTGTGGCCAACACTGGTGTTGTTGCAAAGATTGGTTCTGGGGATCCTCCTTTTGTTGCTCTCCGAGCTGACATGGATGCTTTGCCTATTCAGGAACTGGTTGATTGGGACCATAAGAGCAAAGTTGATGGCAAAATGCATGCTTGCGCGCACGATGCACATGTAGCTATGCTCCTTGGAGCTGCAAAAATATTGCAAGAAATGAAGGAGAAGTTGCTGGCCACTGTGATCCTAATATTCCAACCAGCTGAGGAAAGAGGCACAGGAGCAAGGGACATTATCGCCGAAAAGGTGCTGGAAGATGTAGCAGCTGTTTTTGGCCTGCACCTGGTGCCGGAGTATCCCTTAGGAGTTGTGGCGTCGCGGCCGGGAGAGTTCTTGGCCGGTTGCGGAAGCTTCAAAGCTAACATAAACGGAAGAGACGGAGCTTGCCTCGATCCTGTTTTGGCTGCTTCAACATCAGTGATTAGCTTGCAAAACATCGTTTCAAGGGAGACAGATCCTTTAGATTCTCAGGTAGATCTTCAAACACTCAATTATTCAAACCATTCTTTCTTTGATTTGAAAAAATTATTGTCATGGCAGGTGATTTCCGTGGCCATGGTGAATGCAGGATCTTCCCTGGACATAATCCCCGATTCAGCCACCATTGGAGGCACTTACAGAGCATTCAGCAGAAAGAGTTTCTATTGGCTAAAGAAAAGGATCGAAGAGGTAATCATAGCGCAGGCAGAAGTACACAGGTGCAGCGCGGAGGTTATTTTCAACGGCGATGAGCATCCAACAATCCCTCCGACGAGAAACGACGAGAGAATATATGAAGTGGTTAGGGAAGTTTCAGGCATGATTGTAGGAAAGGAGAAGACAGAAGTAGCACCGGTGTTCACCGGAAGTGAAGATTTCGCGTTTTACTTGGAGAAGGTACCTGGAGCTTTCGTTCTAGTTGGAATGAGAAATGATGAGAGTGGATCCATTCACCCTGCTCATAGTCCTTACTATGTCGTCGACGAAGACGCGCTTCCGATTGGTGCTGCATTGCATGCAGCATTTGCTCTCTCCTTCCATTCCTATTCAACAAATTCTTACATTTGA 1392 0.4569 MDSPRHVLLFFFFFLVPTCFSNECLCSNQTSSNSYYYSSSSSSSSLQDEIVELANRASLLKWMKRIRREIHEHPEVAYEEFNTSALIRHELDQLGVSYQWPVANTGVVAKIGSGDPPFVALRADMDALPIQELVDWDHKSKVDGKMHACAHDAHVAMLLGAAKILQEMKEKLLATVILIFQPAEERGTGARDIIAEKVLEDVAAVFGLHLVPEYPLGVVASRPGEFLAGCGSFKANINGRDGACLDPVLAASTSVISLQNIVSRETDPLDSQVDLQTLNYSNHSFFDLKKLLSWQVISVAMVNAGSSLDIIPDSATIGGTYRAFSRKSFYWLKKRIEEVIIAQAEVHRCSAEVIFNGDEHPTIPPTRNDERIYEVVREVSGMIVGKEKTEVAPVFTGSEDFAFYLEKVPGAFVLVGMRNDESGSIHPAHSPYYVVDEDALPIGAALHAAFALSFHSYSTNSYI* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4722 463 CDD M20_IAA_Hyd 63 454 IPR044757 GO:0009850|GO:0016787
Amo13g4722 463 PIRSF Amidohydrol_AmhX 49 285 IPR017439 GO:0016787
Amo13g4722 463 PIRSF Amidohydrol_AmhX 288 457 IPR017439 GO:0016787
Amo13g4722 463 TIGRFAM amidohydrolases: amidohydrolase 64 273 IPR017439 GO:0016787
Amo13g4722 463 Pfam Peptidase family M20/M25/M40 120 451 IPR002933 GO:0016787
Amo13g4722 463 Gene3D Zn peptidases 64 448 - -
Amo13g4722 463 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 2 7 461 - -
Amo13g4722 463 SUPERFAMILY Bacterial exopeptidase dimerisation domain 229 353 IPR036264 -
Amo13g4722 463 PANTHER PEPTIDASE M20 FAMILY MEMBER 7 461 IPR017439 GO:0016787
Amo13g4722 463 SUPERFAMILY Zn-dependent exopeptidases 57 454 - -
Amo13g4722 463 Gene3D - 228 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4722 Amo-Chr13 145050164 145052913 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4722 K14664 - gmx:100780711 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4722 13 145050164 145052913 Amo13g4722 13 145050164 145052913 ECH