Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4694 ATGACTGGTGTTATTGGAAAGCTTGAGGCAGAAATTGAGGTGAAGTCGAATGCAGACAAGTTCTGGAATGCTATCAGGGATTTTGCAACCATATTTCCTAAGGCCTCACCATCTGTTTACAAAAGTATTCAGATTATTCAGGGTGATGGCAAGGCTCCTGGCTCTGTCTTCAAAACAACTTTAGGTGAAGGCTATGAACTTGTGAAGACAGTCACAGAAAGAATTGAAGATGTTGATGATGCAAAGAGGATAATAATTTATAGTGTGGTTGATGGTGAACTCCTTAAGTACTTGAAGAGTTACAAGGGATATATTAGTGTAACTCCAAAGGGGAATGATAATGGAAGCATTGTGAAATGGTCGTGTGAGTATGAAAAGGCTAGTCAAGAGGCTCCTGAACCTATTTTTATCAAAGAATTTGCAACCAACGTCTTCCCGAAGGTTGATCACTATCTTCTAAGTGCATAA 468 0.3932 MTGVIGKLEAEIEVKSNADKFWNAIRDFATIFPKASPSVYKSIQIIQGDGKAPGSVFKTTLGEGYELVKTVTERIEDVDDAKRIIIYSVVDGELLKYLKSYKGYISVTPKGNDNGSIVKWSCEYEKASQEAPEPIFIKEFATNVFPKVDHYLLSA* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4694 155 SUPERFAMILY Bet v1-like 4 154 - -
Amo13g4694 155 CDD Bet_v1-like 6 152 - -
Amo13g4694 155 PANTHER MLP-LIKE PROTEIN 423 6 153 - -
Amo13g4694 155 Pfam Pathogenesis-related protein Bet v 1 family 6 154 IPR000916 GO:0006952
Amo13g4694 155 PANTHER MLP-LIKE PROTEIN 423 6 153 - -
Amo13g4694 155 SMART Bet_v_1_2 3 155 IPR000916 GO:0006952
Amo13g4694 155 PRINTS Major pollen allergen Bet V1 signature 27 37 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo13g4694 155 PRINTS Major pollen allergen Bet V1 signature 52 61 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo13g4694 155 PRINTS Major pollen allergen Bet V1 signature 69 88 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo13g4694 155 PRINTS Major pollen allergen Bet V1 signature 113 129 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo13g4694 155 PRINTS Major pollen allergen Bet V1 signature 144 154 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo13g4694 155 Gene3D - 1 154 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4694 Amo-Chr13 144635501 144637478 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4694 - - adu:107481122 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4694 13 144635501 144637478 Amo13g4694 13 144635501 144637478 ECH