Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4675 ATGGCTGCTCCTGCAAACGACGTCGTCGCTGTTGAAAGGACATTGCTCAAGCACGTTCGCGACAACGTCCATGGCAATATTTTCCTTGAGCCGATTTTCTTGAAATTTGTTGACACCGAACAATTTCAGAGACTTCGTGATTTGAAGCAACTAGGTCTAACTCATATGGTTTATCCTGGAGCTGTACACACTCGTTTTGAGCATTCACTTGGTGTTTATTGGCTTGCCGGCAAAGCTATTGACATAATAAAAAAATACCAAGGCCCAGAGCTTGGTATTGAACATTGCGATGTGATGGCAGTAAAGCTTGCTGGATTACTGCATGATGTTGGCCATGGTCCCTTCAGCCACATGTTTGAGGGCAAGTTCCTTCCCCGGGTCTTTAATGGTGACAAATGGTCCCATGAGAAAATGTCAGCGAAGATGATAGATTACATTGTTGATGAACACAATATTGATATTGATCCTGAACTCCTCAAGAAAGTGAAGGAAATGATCACTTCAAGCTGTGGCAGTCCTACACAAAATGGAAAGGGAAACCAGTTCTTGTATGATATTGTGGCAAATGGTCGCAATGGAATTGATGTTGATAAGTTTGACTACATTGTTCGTGATTGTCGTGCTTGTGGCCTAGGTTGCAACTTTCAGCCTGAAAGATTGATGGAGACAATGCAAGTCATTGACGATGAAATATGTTATCGTGCCAAAGATTATCTGACAATTCACAAGTTATTTGCAACGCGGGCTGATTTGCATCGAACTGTCTATACACATGCAAAAGTACAAGCAATAGAATTGATGGTCATAGATGCGCTGGTGAAAGCAAACCCATATCTTGATATTGCCTCCTCAATTCATCAACCATCTGAATTTTGGAAGTTAGATGACTCGATTCTTAAAGCAATTGAGATTTCTCCTCGAGAAGAGCTCAAGGAATCCCAAGACTTGATCCGACGCATTCGCAGAAGAGATATATACCAGTTCTGCAATGAGTTTTCAGTACCAAAGGACAGACTTGACCACTTCAGAAACATCACACCCCAGGATATTGTTTGTTCCCAGACAAATGGCATAAATTTGAAGGAAGATGATGTTGCTGTGAGCAATGTTAAAATTGATTTGACATACGGAACAGAAAACCCTCTCGAAAGAATTAAATTCTTCAAGGATTACGAGAGCAAAGAAAAGTTCCCAATCCCAGACTATCGCATCAGTCATTTGTTGCCAGCTTTCAACAAAGACATCATAGTGAGGGTATACAGTAAGAAGCCTGAACTGGTTGGTGCTGTTTCTGCTGCCTTTGAAAATTATCAGTACAAGATATTTGGAAGAAAAGCGCAAGTGCACGAAACTCCTGAGAAGAAGAAACGCGGAAGATGCCATAATTGCATGTCTAACCTATTGACCCCCCCAGCTTTGAATTTGTAA 1428 0.4139 MAAPANDVVAVERTLLKHVRDNVHGNIFLEPIFLKFVDTEQFQRLRDLKQLGLTHMVYPGAVHTRFEHSLGVYWLAGKAIDIIKKYQGPELGIEHCDVMAVKLAGLLHDVGHGPFSHMFEGKFLPRVFNGDKWSHEKMSAKMIDYIVDEHNIDIDPELLKKVKEMITSSCGSPTQNGKGNQFLYDIVANGRNGIDVDKFDYIVRDCRACGLGCNFQPERLMETMQVIDDEICYRAKDYLTIHKLFATRADLHRTVYTHAKVQAIELMVIDALVKANPYLDIASSIHQPSEFWKLDDSILKAIEISPREELKESQDLIRRIRRRDIYQFCNEFSVPKDRLDHFRNITPQDIVCSQTNGINLKEDDVAVSNVKIDLTYGTENPLERIKFFKDYESKEKFPIPDYRISHLLPAFNKDIIVRVYSKKPELVGAVSAAFENYQYKIFGRKAQVHETPEKKKRGRCHNCMSNLLTPPALNL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4675 475 CDD HDc 63 210 IPR003607 -
Amo13g4675 475 Gene3D - 325 443 - -
Amo13g4675 475 PANTHER DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE 6 457 - -
Amo13g4675 475 SMART hd_13 61 211 IPR003607 -
Amo13g4675 475 SUPERFAMILY HD-domain/PDEase-like 15 443 - -
Amo13g4675 475 Pfam HD domain 65 203 IPR006674 -
Amo13g4675 475 Gene3D Hypothetical protein af1432 15 324 - -
Amo13g4675 475 Pfam HD associated region 218 327 IPR045509 -
Amo13g4675 475 PANTHER METAL-DEPENDENT PHOSPHOHYDROLASE 6 457 - -
Amo13g4675 475 ProSiteProfiles HD domain profile. 65 202 IPR006674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4675 Amo-Chr13 144423984 144429058 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4675 K22544 - gmx:100796869 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4675 13 144423984 144429058 Amo13g4675 13 144423984 144429058 ECH