Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4669 ATGGCAGAATCAAAACCAGGATTGAGGAAGCCTGTGTTTACCAAGGTTGATCAGCTTCGCCCCGGMACCAGTGGGCATACTTTGACTGTGAAGGTGGTTAGTACCAAGTTGGTGATGCAGAAGGGTCGTCCTGATGGYCCTCAACCTCGWCAAATGCGAATTGCTGAGTGTTTGGTGGGGGATGAGACCGGAATGATCATTTTRACAGCCAGYAATGATCAAGTGGATGAGATGAAGGAGGGATCTACTGTGATCCTGCGCAATGCCAAAATTGACATGTTCAAAGGATCAATGAGACTTGCTGTRGACAAGTGGGGCCGTGTCGAAGTCACAGAACCGGCTAGCTTCACTGTCAAGGAAGACAATAACTTGTCCCTCATCGAATATGAACTGGTGAACGTTGTGGAGTGA 411 0.4769 MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVSTKLVMQKGRPDGPQPRQMRIAECLVGDETGMIILTASNDQVDEMKEGSTVILRNAKIDMFKGSMRLAVDKWGRVEVTEPASFTVKEDNNLSLIEYELVNVVE* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4669 136 SUPERFAMILY Nucleic acid-binding proteins 6 134 IPR012340 -
Amo13g4669 136 CDD SoSSB_OBF 27 110 - -
Amo13g4669 136 Gene3D - 23 126 IPR012340 -
Amo13g4669 136 PANTHER OS05G0244600 PROTEIN 1 136 - -
Amo13g4669 136 PANTHER BNAA07G09820D PROTEIN 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4669 Amo-Chr13 144301055 144304886 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4669 - - csv:101212074 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4669 13 144301055 144304886 Amo13g4669 13 144301055 144304886 ECH