LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo13g4667	ATGGCGAGGTCATTTAAAAAGTGCATGATGCTTTGTTGTACCGGCAAGATTTCCTCGAAGGAAGACATGGCAGGAGACTCATACGATGACGCCATTGCAGCCCTCTCCGACCTCCTCAAGGACAAAGCCGAACTCGGCAGCCTGGCCGCCGCAAAGATCAAGCAGCTCACGGCGGACCTGGAGGCCGCCGGTTCCACTCCATTCAACCCGGATGACAGGATCCGAACCGGCTTTGACCACTTCAAGAAGGAGAAATTCGAAAAGAATCCGGATTTGTTTGGCGAACTCGCTAAAGGACAGAGCCCAAAGTTTATGGTTTTTGCTTGCTCAGATTCAAGAGTTTGCCCATCTCATGTTCTGGATTTCCAACCTGGTGAAGCTTTTGTGGTCCGAAACATTGCCAACATGGTTCCACCATATGAAAAGACGAAGTACGCAGGAACAGGGGCAGCCATTGAATATGCGGTCTTACATTTAAAGGTGGAGAATATTGTGGTAATTGGACATAGCTGCTGTGGAGGTATAAAGGGACTCATGTCTATCCCTGATGATGGGACCACTGCAAGTGACTTCATAGAGCAATGGGTCCAAATTTGTAATCCAGCAAGATCCAAGGTTAAAGGAGGAGCTGGTGACTCAAGCTTTTCAGATCAATGTGCCAGTTGTGAAAAGGAAGCTGTGAATGTATCACTTGGGAACCTATTAACTTATCCATTTGTGAGAGAAGCAGTAGTGAGTAAAAAGCTTGCATTGAAGGGTGCACATTATGATTTTGTTAAAGGCAGCTTTGAGTTGTGGGATTTGGACTTCAAAGTCACTCCCCCTGTGTCCCTGCTTTAA	840	0.469	MARSFKKCMMLCCTGKISSKEDMAGDSYDDAIAALSDLLKDKAELGSLAAAKIKQLTADLEAAGSTPFNPDDRIRTGFDHFKKEKFEKNPDLFGELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNIANMVPPYEKTKYAGTGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASDFIEQWVQICNPARSKVKGGAGDSSFSDQCASCEKEAVNVSLGNLLTYPFVREAVVSKKLALKGAHYDFVKGSFELWDLDFKVTPPVSLL*	280

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo13g4667	279	CDD	beta_CA_cladeB	77	266	IPR045066	GO:0004089\|GO:0008270
	Amo13g4667	279	SUPERFAMILY	beta-carbonic anhydrase, cab	63	274	IPR036874	GO:0004089\|GO:0008270
	Amo13g4667	279	PANTHER	CARBONIC ANHYDRASE	23	278	IPR001765	GO:0004089\|GO:0008270
	Amo13g4667	279	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 2.	153	173	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Amo13g4667	279	Pfam	Carbonic anhydrase	105	262	IPR001765	GO:0004089\|GO:0008270
	Amo13g4667	279	Gene3D	Carbonic anhydrase	63	278	IPR036874	GO:0004089\|GO:0008270
	Amo13g4667	279	SMART	Pro_CA_2	97	267	IPR001765	GO:0004089\|GO:0008270
	Amo13g4667	279	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 1.	109	116	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Amo13g4667	279	PANTHER	CARBONIC ANHYDRASE	23	278	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo13g4667	Amo-Chr13	144286609	144297065	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo13g4667	K01673		-	gmx:100810496	473.396

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo13g4667	13	144286609	144297065	Amo13g4667	13	144286609	144297065	ECH