Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g4607 ATGAAGTTCATGAAACTTGGATCTCGTCCTGATACCTTCTACACTGCTGATTCAGTAAGGGCAGTAACTTGTGAAGTTTCAAGTGACCTGATAATTCAAGTGAAAGGAAGCAGATACCTTCTTCACAAGTTTCCCCTTCTTTCCAAGTGTTTGCGGCTCCAAAGACTCTGCTCAGAGTCACCTGATTCAGGCCAGCCTCAGATAGTGCAGCTCCCTGACTTCCCCGGCGGCGCCGAGACATTTGAGCTCTGTGCAAAGTTCTGCTATGGAATGACCATAACACTCAGTGCCTACAACATTGTGGCGGCGCGCTGTGCCGCCGAGTACCTTCAGATGACTGAGGATGTAGAAAAAGGGAACTTGATATACAAGCTTGAAGTGTTCCTGAATTCTTGCATCCTCCATGGCTGGAAGGACTCAATTGTGACACTACAAACCACAAAATCAATGGCTCTGTGTCTGTGGTCAGAGGACTTGGCCATTACAAGCAGGTGCATTGAAGCCATAGCCTCAAAGGTCTTAAGCCACCCTTCTAAGGTGAGTTTGTCACATAGCCATTCTAGAAGGTTGAGAGATGATGTCTCTTCTTGCAATGGAACCGAAAGCATGAGGCACAAGTCAACAAGTAAGGGATGGTGGGCGGAAGATTTAGCAGAATTGACCATAGATTTGTACTGGAGAGCCATGATTGCTATCAAATCCGGCGGCAAGACGCCGTCCAATTTGATCGGCGATGCGCTCAAAATCTATGCCTCAAGGTGGCTGCCAAGCATCACAACAAAAAGCAATGGACATGCCAAGAACAAGAAGGAAGAATCTCAAGAGTTATCAGACTCAGATTCGGATTCAGCAAGCGAAATAGCCTCCAAGCATCGTTTACTTTTGGAATCTATAGTGAGCTTGCTACCTGCTGAAAGAGGTGCTGTTTCTTGCAGCTTTCTTCTTAAGCTCTTGAAGGCTTGCAATATTCTGAATGCATCTTGTTCTTCAAAGAGTGAATTGGCAAGAAGAGTAGGACTTCAATTGGATGAAGCAACAGTGAATGATCTTTTGATACCTTCACTTTCTCACACAAATGATATGGCTTATGATGTGGATTTGGTGATGGCAATATTGGAACAGTTTATGTCACAGGGGCAGAGTCCTCCAACTAGTCCTCCAAGAATGAGGATGATTGCCTGCGAGAGAAGGCGGTCGCGGTCGGCCGAGAACATTGATTTCGAGTTCCAGGAGAGCAGGAGGTCCTCCTCAGCTTCTCATGGATCAAAGTTGAAGGTGGCTAAGCTTGTGGATAGGTACCTTCAGGAGGTGGCCAGGGATGTCAACTTGCCTTTGTCAAAGTTCATTGCTCTTGCTGAGGCTATACCAGATTTTGCAAGACATGATCATGATGATCTATACAGAGCTATTGATACTTATCTCAAGGCTCATCCAGAACTGAATAAAAGCGAAAGAAAAAGACTATGTAGGATCCTAGACTGCAAGAAACTATCCATGGAAGCATGCATGCATGCAGCACAAAATGAGCTACTCCCTCTAAGAGTGGTTGTCCAAGTCCTCTTCTTTGAGCAAGCCAGAGCAGCAGCATCCGGCGGCGGCAACGGAAAAGTCGCCGACATACCAAGCAACATCAAGGCATTACTGAAAGCACATGGCATTGACCCTTCTTCAAAGCATCCCCCACCATTGAGTACCACCACAAGCATTCATGGTGATGATAACTGGAGTGTCAATGGACTCAAGACACCAAAGCCAACAACAACAGCAACAAGGAATCCAACTCTGAGAATGAAGCTAGCAGAGGATAAAGACATAGATAACATTACCAATGATGAAAATGGGAGAGCTGCTTCTAGATCTAAGGGTATTAATCAACCAAAACGAATGCTTAGTAAGTTCTGGTCTACAAACAAAGGTGTCACAGGAAAGAATTAG 1935 0.4537 MKFMKLGSRPDTFYTADSVRAVTCEVSSDLIIQVKGSRYLLHKFPLLSKCLRLQRLCSESPDSGQPQIVQLPDFPGGAETFELCAKFCYGMTITLSAYNIVAARCAAEYLQMTEDVEKGNLIYKLEVFLNSCILHGWKDSIVTLQTTKSMALCLWSEDLAITSRCIEAIASKVLSHPSKVSLSHSHSRRLRDDVSSCNGTESMRHKSTSKGWWAEDLAELTIDLYWRAMIAIKSGGKTPSNLIGDALKIYASRWLPSITTKSNGHAKNKKEESQELSDSDSDSASEIASKHRLLLESIVSLLPAERGAVSCSFLLKLLKACNILNASCSSKSELARRVGLQLDEATVNDLLIPSLSHTNDMAYDVDLVMAILEQFMSQGQSPPTSPPRMRMIACERRRSRSAENIDFEFQESRRSSSASHGSKLKVAKLVDRYLQEVARDVNLPLSKFIALAEAIPDFARHDHDDLYRAIDTYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAASGGGNGKVADIPSNIKALLKAHGIDPSSKHPPPLSTTTSIHGDDNWSVNGLKTPKPTTTATRNPTLRMKLAEDKDIDNITNDENGRAASRSKGINQPKRMLSKFWSTNKGVTGKN* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g4607 644 MobiDBLite consensus disorder prediction 554 593 - -
Amo13g4607 644 MobiDBLite consensus disorder prediction 261 282 - -
Amo13g4607 644 MobiDBLite consensus disorder prediction 629 644 - -
Amo13g4607 644 ProSiteProfiles NPH3 domain profile. 211 526 IPR027356 -
Amo13g4607 644 CDD BTB_POZ_NPY3-like 28 124 - -
Amo13g4607 644 Gene3D Potassium Channel Kv1.1; Chain A 17 118 IPR011333 -
Amo13g4607 644 PANTHER OS12G0117600 PROTEIN 1 638 IPR043454 -
Amo13g4607 644 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 638 - -
Amo13g4607 644 MobiDBLite consensus disorder prediction 559 593 - -
Amo13g4607 644 MobiDBLite consensus disorder prediction 605 644 - -
Amo13g4607 644 SUPERFAMILY POZ domain 23 116 IPR011333 -
Amo13g4607 644 Pfam NPH3 family 212 502 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g4607 Amo-Chr13 143385587 143388450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g4607 26 534 EF-hand Containing Proteins AT3G44820 36.069 1.65e-94 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g4607 - - adu:107481370 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g4607 13 143385587 143388450 Amo13g4607 13 143385587 143388450 ECH