Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3894 ATGAACCATCCGAAGGGGATAACGGTTGATGACCGAGGGAATATCTATGTTGCAGATACTACTAACATGGCAATTAGGAAAATTAGTGATTCAGGGGTTACTACAATTGCAGGAGGAAAATGGATTCGTGGAGGGGGCCATGTTGATGGACCAAGTGAAGAAGCTAAGTTTTCTGATGACTTTGACGTGGTTTATGTTGGTAGTAGTTGTTCCTTACTCGTCATAGACAGAGGAAACCGAGCGATCAGGGAAATTCAACTTCACTTTGATGACTGTGCCTATCAATATGGTAGCGGATTCCCACTTGGGATTGCAATGCTTGTTGGGGCCGGCTTCTTTGGTTATATGCTGGCATTGTTGCAGCGAAGACTTGGTACAATTGTTGGTTCACAGGATGATCAGGTTCAAGTGATGTCTTCCGTTTCACCTAGTCCTTTTCAACAGCCCATGAAATCTGTGAGGCCTCCCTTGATTCCATCCGAATTCGAACCTGAAAAGCAAGAGGAAGGCTTCTTTGGATCCCTTGGAAAGCTACTTGCCAATGCCTCTGCATCAATGGTGGAGATAATGGGAGGAATATTTCCTGTTTTCAGAAGAAAACCACAAAGCTACAAGTTTCAAAGACAACCTCTGGTCCCACTGCAACATCAAAAGCAAGCTTGGCCGGCACAGGAAAGTTTCGTGATTCCTGATGGAGATGAGCCTCCTTCTATTGACATGAGAACCCCAACCCCTCGAAAAACATACCCTTTCATGTCTAAAGACGCCGAGAAAATGCAGCAATTAAGGCAAAGTAGAGCATTTTACAATGGATGGGACGGTGACCTTCAGCAGCAGCAACTGCAGCAGCAGCAACAACCACAAAGACATCATCATCGTCATCAGTACCAGTCATCGACCCCTCACACTTACTTCGAGCAAAGCCGCGAGACAACCAATGAGATAGTGTTTGGGGCGGTGCAGGAACAAGATGGTAAGGAGGAGTCTGTGGTAATCAAGCCTGTGAACTATGGTGACTCGCTATATGAACATCACAATATCCGGTCTAGAGTGAATTCCATGGGTTATACCCACAGGTATTGA 1083 0.4561 MNHPKGITVDDRGNIYVADTTNMAIRKISDSGVTTIAGGKWIRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLVIDRGNRAIREIQLHFDDCAYQYGSGFPLGIAMLVGAGFFGYMLALLQRRLGTIVGSQDDQVQVMSSVSPSPFQQPMKSVRPPLIPSEFEPEKQEEGFFGSLGKLLANASASMVEIMGGIFPVFRRKPQSYKFQRQPLVPLQHQKQAWPAQESFVIPDGDEPPSIDMRTPTPRKTYPFMSKDAEKMQQLRQSRAFYNGWDGDLQQQQLQQQQQPQRHHHRHQYQSSTPHTYFEQSRETTNEIVFGAVQEQDGKEESVVIKPVNYGDSLYEHHNIRSRVNSMGYTHRY* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3894 360 MobiDBLite consensus disorder prediction 278 308 - -
Amo13g3894 360 Pfam NHL repeat 2 27 IPR001258 GO:0005515
Amo13g3894 360 ProSiteProfiles NHL repeat profile. 1 31 IPR001258 GO:0005515
Amo13g3894 360 PANTHER NHL REPEAT PROTEIN 1 360 - -
Amo13g3894 360 MobiDBLite consensus disorder prediction 227 250 - -
Amo13g3894 360 Gene3D - 1 86 IPR011042 -
Amo13g3894 360 PANTHER - 1 360 - -
Amo13g3894 360 SUPERFAMILY Calcium-dependent phosphotriesterase 2 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3894 Amo-Chr13 130642787 130644388 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3894 - - gmx:100781836 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3894 13 130642787 130644388 Amo13g3894 13 130642787 130644388 ECH