Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3773 ATGGCATCCTCACACTCGGAAGCTGCTAAGATGGAACAAATTATAACAGAGTTCTTTGCCAAAAGCATTCATATAATACTTGAATCAAGGGCACTTTCTGTCTCCTCACGTAGTTCCTGTCTTGATCAAGCTATCTCCTCTCCATGTTCCTCATCTTCCTCCTCCCCCAGCGTGCGCCCCAGGGATAAATGGTTCAATTTGGCTCTTCGTGATTGCCCTGCCGCCATAGATAACATTGACCTCTTACGCCGCAACAATCTTGACTTTATAGTCATTGATGTTATTTTAGTGCAAAAGCCTCTTGGCTGGGACCCCATGAGTTTATCCCCCAAAAGGGTTCTTCCTAGGAGTTCTTCACTCAAGGAAAGATACCCTTTCAGCTGGAATACCGATCAGGAAGAATTGGGACTCGACACAAACACTGAAAAGATTGTAGAGAGATGGGTGGTTCAGTATGAGAGCAGAAAGACAAGGGATTCTAGTTCTGGTACTAGGAGGTCAAGTAATGTTTCTTTGCATGCCTTGTATAAGAAATCAACTTTACTTCTGAGGTCCTTGTATGCCACTGTTCGACTTCTACCTGCCTACAAAATTTTCAGAGAGCTAAATTCGTCTGCACAGATTCGTCCCTTTACTCTTGCTCACCGGGTATCTTCCTTTTGTGAGCCCTTCACCCGTAAAGAGGAAGCAGAAATGATGAAATTTGGGTTCACCCCTGTGGATGCTTCTTCTGGTAGGCTGTGCCTTTCGGTGATGTATCGCCCATCTGCATCGGATGTGAGCTCTGAACCTTCAACTCCGTTGTCCCCGCAAGTTATAACTGACTATGTTGGCAGTCCATTGCCAGATCCATTGAGGAGGTACCCGTCTGGATTGCCATCACATGGCTCTCCTTCGTCATTGCCATTTTTGAGGCGACATAGTTGGAGTCACGACCATTGGAGAGCCTCACCTCCTTCCATTACTTATTCACCTTCACCAACATATTCAGAATCGCACACGTCTATATCTAATGCAAGTTCTCGGCGTTTACCACCTTCAAGTTTGCCCCCTCATCCAACTGAGATGTCCTTGTTTCAGAAGAAGAATTCAGGTTTTGATGAGTGTTATCCCTCTCCATCACCTTCAATATACTATCCCGGGTCATTACCATCTAAACCACTTTTACGATCTGAAAGTGCTCCGGTCAGCATACCTAATGCTGAAGCTGCAGTTTCCCCTGGATACCCCAACACTAACAGGCATAATTTGCCATCAACTGCTCCACTTAGAGGTTTAAGGTGTGTTTCTAAGAACGATAGGGGTGTGAACACAATGCAAACAGGTGCAACAGCTGAGAAGTTGTTTCCTCTTGGAAAAGATGAACTTCGTAAATACTCTGGAATCAAGATATCAGCTTGCAGTTCACCACAAAGCTCAAATAGGTCTTATCAGGATGATTTTGATGAAACTGATTTTTCTTGCCCCTTTGATGTTGATGATGATGATCTGACAGATCCAGGCAGCAGGGCGGAATCATTTGATCATGGTCATATGGCTGAGGCATTTGAAGCTGGAGGATTCCTTCCCATCAGAAAGTCCCAGGATGCTGCTGTTGGTGCACTTGTACGTATGCTGAAGAAAGCACCACCTCTCCGGCAAGATTTCTCTACTTCTGAACACTTGTCACACAGCACACGCCCCGAAACCTGGAATGCTAACAACATTCAAGCTCTAGAAGCACCAGTGCCAGCAAGCATGATGTCTTCCGGGCTCACAGCAACAAGGAAAACAACAACTGATGCATTGGAAGAGTTTCATGGCTACAGAGAGATGAAAAACCTGTTGCTTACACGAGGTAGTAAGCCCCAGATATAG 1857 0.4534 MASSHSEAAKMEQIITEFFAKSIHIILESRALSVSSRSSCLDQAISSPCSSSSSSPSVRPRDKWFNLALRDCPAAIDNIDLLRRNNLDFIVIDVILVQKPLGWDPMSLSPKRVLPRSSSLKERYPFSWNTDQEELGLDTNTEKIVERWVVQYESRKTRDSSSGTRRSSNVSLHALYKKSTLLLRSLYATVRLLPAYKIFRELNSSAQIRPFTLAHRVSSFCEPFTRKEEAEMMKFGFTPVDASSGRLCLSVMYRPSASDVSSEPSTPLSPQVITDYVGSPLPDPLRRYPSGLPSHGSPSSLPFLRRHSWSHDHWRASPPSITYSPSPTYSESHTSISNASSRRLPPSSLPPHPTEMSLFQKKNSGFDECYPSPSPSIYYPGSLPSKPLLRSESAPVSIPNAEAAVSPGYPNTNRHNLPSTAPLRGLRCVSKNDRGVNTMQTGATAEKLFPLGKDELRKYSGIKISACSSPQSSNRSYQDDFDETDFSCPFDVDDDDLTDPGSRAESFDHGHMAEAFEAGGFLPIRKSQDAAVGALVRMLKKAPPLRQDFSTSEHLSHSTRPETWNANNIQALEAPVPASMMSSGLTATRKTTTDALEEFHGYREMKNLLLTRGSKPQI* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3773 618 Pfam Autophagy-related protein 13 15 256 IPR018731 GO:0006914|GO:1990316
Amo13g3773 618 PANTHER UNCHARACTERIZED 5 614 IPR040182 GO:0000045
Amo13g3773 618 Gene3D HORMA domain 7 258 IPR036570 -
Amo13g3773 618 MobiDBLite consensus disorder prediction 321 358 - -
Amo13g3773 618 MobiDBLite consensus disorder prediction 321 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3773 Amo-Chr13 127217051 127221364 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3773 K08331 - gmx:100798585 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3773 13 127217051 127221364 Amo13g3773 13 127217051 127221364 ECH