Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3756 ATGGCTTCTTCTAAGATCTTCTTATACCATTTACTTCTCCTGTTTTTTGTACTTGGAGACCCAAGATTATATGCGAATGGGGACACCAAGTTAATGAAGAAAACATGCAGGCACACAAAGTACTACGATCTATGCTTCTCTTCCCTGAAATCAGATCCAACAAGTTCAAACGCGGACCCAAGGGGACTAGCAATGATCATGGTTGGGGTTGCCATGGCCAATGCAACATCCACTTCTTCCTACTTGTCTTCTCAGTTGCATAACCCGGCCACCAATGACACTACCTTCAAAAGGGTCCTTAAAGAATGTTTAGACAAGTACACATATGCAGGTGAATCACTTCAAGCTTCTGTTCAAGATTTGGCTGATCAAGTCTATGATTATGCTTACATGCACGTTTCTGCGGCCAAAGATTATCCAAATGTTTGCCACAACTTGTTCAAACAGAATCCTGCTTTGGTTTACCCTCCTGAACTTGCTCGTAGAGAGAATGCTTTGAAGCATATATGTGATGTTGCCATGGGGATTATTGATGATTTTAATTGGTATTAG 552 0.413 MASSKIFLYHLLLLFFVLGDPRLYANGDTKLMKKTCRHTKYYDLCFSSLKSDPTSSNADPRGLAMIMVGVAMANATSTSSYLSSQLHNPATNDTTFKRVLKECLDKYTYAGESLQASVQDLADQVYDYAYMHVSAAKDYPNVCHNLFKQNPALVYPPELARRENALKHICDVAMGIIDDFNWY* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3756 183 Pfam Plant invertase/pectin methylesterase inhibitor 31 175 IPR006501 GO:0004857
Amo13g3756 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 178 IPR035513 -
Amo13g3756 183 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 178 IPR006501 GO:0004857
Amo13g3756 183 CDD PMEI_like 36 178 - -
Amo13g3756 183 PANTHER CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 16 179 - -
Amo13g3756 183 SMART PMEI_2 27 176 IPR006501 GO:0004857
Amo13g3756 183 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 179 - -
Amo13g3756 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 180 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3756 Amo-Chr13 126824247 126825120 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3756 - - adu:107480265 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3756 13 126824247 126825120 Amo13g3756 13 126824247 126825120 ECH